Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0730 ATGGCTGTGAAATCTTATCTGGTACCTGGGTCAACGACTTCCCAAGTTGGCTGGCGTGATTTATTGACTAAACATCCTGGAATTGCATTGAATTGGGGGAGTAGACAGAAAAGGGCCCGCAATTGGAGAAATAAGGTTACTGTGCGGATGGCTGATCAGACGAGCCATGATATGTCCAAGGGATTGCAGAAAGATTTAAGCTCGCTTCCAAAACCATTGTCCGTATCTAATATTTTGTCTGCTTCTGATAATGGTGCAGAAATTCGAATATCATTCAAGGGGGTACCAGGTTCCTACAGCGAGGACGCAGCAATAAAAGCATACCCTAATTGTGAGACAGTTCCATGCGGTGATTTTGAAGCTGCTTTTAAGCAGGCTGTTGAGTTATGGTTGGCCGACAAAGTTATCATTCCCATTGAAAATACTTCAGGAGGAAGCCTTCATCGAAACTATGATTTACTTCTTCGCCATAGGCTTCACATTGTTGGTGAGGTGCAGCTGGCAATTAATTTCTGCCTTCTAGCTCTACCTGGTGTCAGAGCAGAGTTCTTAGAACGTGTTCTAAGCCATCCCCAGGCACTTGATCTTTGTGATGCCTTCCTTACTAAATTAAATGTTGCTAGAGAAGGTGTTGATGATGCTGCTACTGCTGCTGAGTATGTAGCTTCAAATGGCCTGTACAAAGCTGGCGCGATTGCAAGTCGTCGAGCTGCAGAAATTTATGGGCTTAATGTACTTGCAGAAAGAATCCAAGATGATCCTGAAATTATCAGTCGTTATCTAATTCTTGCCAGGGATCCAATAATTTCAAGAGCTGATAAGCCATTCAAGACAAGTATAGTGTTTAGTTTGGACGAGGGTCCTGGGGTATTGTTTAAGGCATTGGCAGTGTTTGCATTGAGGGACATCAATTTGAGTAAGATTGAAAGTCGACCACAAAGAAATCGACCATTAAGAGTGGTTGATGACTCCAACACTGGAACTGCTAAGTATTTCGACTATCTTTTCTATATTGATTTTGAAGCTTCTATGGCTGAGCCCCGGGCACAAACTGCTCTAGGTCATCTGCAGGAATTCGCCACATTTATTCGAGTTTTGGGCTGCTATCCTATGAGTGCAACCATATAG 1128 0.4317 MAVKSYLVPGSTTSQVGWRDLLTKHPGIALNWGSRQKRARNWRNKVTVRMADQTSHDMSKGLQKDLSSLPKPLSVSNILSASDNGAEIRISFKGVPGSYSEDAAIKAYPNCETVPCGDFEAAFKQAVELWLADKVIIPIENTSGGSLHRNYDLLLRHRLHIVGEVQLAINFCLLALPGVRAEFLERVLSHPQALDLCDAFLTKLNVAREGVDDAATAAEYVASNGLYKAGAIASRRAAEIYGLNVLAERIQDDPEIISRYLILARDPIISRADKPFKTSIVFSLDEGPGVLFKALAVFALRDINLSKIESRPQRNRPLRVVDDSNTGTAKYFDYLFYIDFEASMAEPRAQTALGHLQEFATFIRVLGCYPMSATI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0730 375 SUPERFAMILY Periplasmic binding protein-like II 89 270 - -
Prci6g0730 375 Pfam Prephenate dehydratase 90 267 IPR001086 GO:0004664|GO:0009094
Prci6g0730 375 ProSiteProfiles Prephenate dehydratase domain profile. 89 265 IPR001086 GO:0004664|GO:0009094
Prci6g0730 375 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 42 372 - -
Prci6g0730 375 FunFam Arogenate dehydratase 272 373 - -
Prci6g0730 375 Gene3D - 83 172 - -
Prci6g0730 375 CDD ACT_CM-PDT 277 370 - -
Prci6g0730 375 ProSitePatterns Prephenate dehydratase signature 2. 305 312 IPR018528 GO:0004664|GO:0009094
Prci6g0730 375 SUPERFAMILY ACT-like 261 371 IPR045865 -
Prci6g0730 375 Gene3D - 173 253 - -
Prci6g0730 375 Gene3D - 272 373 - -
Prci6g0730 375 ProSiteProfiles ACT domain profile. 279 370 IPR002912 -
Prci6g0730 375 CDD PBP2_Ct-PDT_like 88 267 - -
Prci6g0730 375 FunFam Arogenate dehydratase 171 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0730 Prci-Chr6 4852311 4858476 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0730 K05359 - qsu:112031593 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0730 6 4852311 4858476 Prci6g0730 6 4852311 4858476 ECH