Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0676 ATGGGAAAGAATCAGAAGTCAGACCTGGGGAGGGCTTTGGTGAAGCAGCACAACCAGATGATCCAGCAGAGTAAGGAAAAGGGTCGGTTCTACAAGAATCAGCAGAAGAAGATTTTGGAATCGGTCACAGAGGTCACCGACATTGATGCCATCATCGAACAAGCAGACGAGGCTGAGCGTCTCTTCGTCGCCAACCACCCGGCCCCTGACCTCCCCATTAGTCTGGATGCAAGCTCTAGCACTAGGGACATGACGCCAGAGGAGAGGAGAGATCTTCAGAAGAGAGAGGAGGCGCTGCATGCTGGCAGCCTGCGAGTTCCACGCAGGCCGCCGTGGAGCGTGAACATGTCTGTGGAGGAGCTTGATGCCAATGAGAGACAAGCTTTCTTGACTTGGCGTCGCAGTCTAGCAAGGCTTGAGGAAAATGAGAAGCTTGTCCTCACACCCTTTGAGAAGAATCTTGATATTTGGAGACAGCTTTGGCGAGTTGTTGAGCGTAGTGATTTGCTTGTGATGGTTGTTGATTCACGAGATCCACTTTTTTACCGCTGTCCTGATCTTGAGGCATATGCAAGAGAGGTTGATGAGCATAAACGGACATTACTGCTGGTTAACAAGGCAGATCTTTTGCCCACTTCTACCAGAGAGAAATGGGCAGAGTACTTCCAGGCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTTCTGCAGCTCTTGAAGGCAAAAAGCTTCGTTCATCTTTGGATATTGATGATTTGAAGAAGTCCAGTAACCCAGCTACTAAAATATATGGCAGGGATGAGCTCCTGGCTCGGTTACAGTCAGAAGCAGAAGAGATTGTAGAGAGGAGGAGAAAATCAAGCTCCTCTGACACAGGGCCTTCTGATATTCTATCTCGTAGTGAAAATGCTTCTGGTAGCTCGTCATCAAGTAATGTAATTGTGGGATTTGTTGGTTATCCTAATGTGGGTAAAAGTTCAACTATCAATGCTTTGGTAGGCCAAAAACGGACAGGTGTTACCTCCACTCCTGGGAAGACAAAGCACTTCCAAACATTGATAATTTCCGATAGGCTAACACTTTGTGACTGTCCTGGGTTAGTTTTTCCGTCCTTTTCAAGCTCAAGATATGAGATGATTGCCTGTGGGGTGTTACCCATTGATAGAATTACTGAACACAGGGAGGCTGTCCAGGTTGTGGCTGATAAAGTTCCTAGGCATGTCATCGAGGAAGTTTATAAGATCACCCTCCCAAAGCCTAAGCCATATGAACCCCAATCTAGGCCTTCTCTAGCGTCTGAACTTCTGAGAACTTATTGTGCATCTCGTGGGTATGTTGCCTCTAGTGGGCTACCTGATGAAACTAGAGCTGCCCGTCAGATACTGAAAGATTACATTGATGGGAAGCTGCCTCATTATGAAATGCCCCCTGGAATTTCGAATGAGGATCAAGCTCTGTCCAACCCTGGTAGACAGGACTCGGTTAACTTGAACGAGGCAGATTCTTGTCATAATGAAAATTCTTCAGATGTCGAGAGTGAACTTGCACCTAGTGTTGAGCACGTGTTGGATGATCTTAATTCATTTGACATAGCTAATGACCTTGCCCCTAAGAAAGCTACTGTCAAGAAGTCTAATGCTTCTCACAAACATCATAAGAAGCCTCAGAAGAAGAAAGATCGTTCATGGAGAGTAGGAAATGATGACGGTGATGGGATGCCAGTTGCCAGATTCTTTCAGAAACCAGTAAATACAGGTCCAGTGAATATATGA 1779 0.4615 MGKNQKSDLGRALVKQHNQMIQQSKEKGRFYKNQQKKILESVTEVTDIDAIIEQADEAERLFVANHPAPDLPISLDASSSTRDMTPEERRDLQKREEALHAGSLRVPRRPPWSVNMSVEELDANERQAFLTWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPTSTREKWAEYFQAHDILFIFWSAKAASAALEGKKLRSSLDIDDLKKSSNPATKIYGRDELLARLQSEAEEIVERRRKSSSSDTGPSDILSRSENASGSSSSSNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDRLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRITEHREAVQVVADKVPRHVIEEVYKITLPKPKPYEPQSRPSLASELLRTYCASRGYVASSGLPDETRAARQILKDYIDGKLPHYEMPPGISNEDQALSNPGRQDSVNLNEADSCHNENSSDVESELAPSVEHVLDDLNSFDIANDLAPKKATVKKSNASHKHHKKPQKKKDRSWRVGNDDGDGMPVARFFQKPVNTGPVNI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0676 592 Gene3D - 376 478 IPR023179 -
Prci6g0676 592 MobiDBLite consensus disorder prediction 545 562 - -
Prci6g0676 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 447 IPR027417 -
Prci6g0676 592 MobiDBLite consensus disorder prediction 283 312 - -
Prci6g0676 592 MobiDBLite consensus disorder prediction 483 516 - -
Prci6g0676 592 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 372 IPR030378 GO:0005525
Prci6g0676 592 FunFam Large subunit GTPase 1 377 478 - -
Prci6g0676 592 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 566 IPR043358 GO:0003924
Prci6g0676 592 MobiDBLite consensus disorder prediction 475 518 - -
Prci6g0676 592 MobiDBLite consensus disorder prediction 293 312 - -
Prci6g0676 592 CDD HSR1_MMR1 156 372 - -
Prci6g0676 592 Gene3D - 156 373 IPR027417 -
Prci6g0676 592 FunFam Large subunit GTPase 1 156 373 - -
Prci6g0676 592 PRINTS GTP1/OBG GTP-binding protein family signature 363 378 IPR006073 GO:0005525
Prci6g0676 592 PRINTS GTP1/OBG GTP-binding protein family signature 317 337 IPR006073 GO:0005525
Prci6g0676 592 MobiDBLite consensus disorder prediction 541 592 - -
Prci6g0676 592 Pfam 50S ribosome-binding GTPase 317 377 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0676 Prci-Chr6 4505152 4509573 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0676 K14539 - cave:132164119 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0676 6 4505152 4509573 Prci6g0676 6 4505152 4509573 ECH