Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0636 ATGATTATGGCGCCAAGAAAAGCTCACGAGCGTCAACTGCTCGTGGAGTCCATGTACTCAGTCATTGCACTTCTCTTCCTCCTTGTCACTTGCGTTGAGCTCTGTGACGCCGCCACTGTAGTCGATGTCTACCGCCTGATTCAGTATGATATGTCCGGTGCTCCATTCGGATCTCGACTCGCTAGTCTCAATCACCATGCCGGCTCTCTTCACTTCTCCCCCCATGCTGATCTTTCACGCACTGTGCTCGTGATTCCGCTTCGCGAGTTGAACATGACTTTTGTCAAAGAATATATTGTTGAAAAGAAACCACTGGGGGGCTTATTATTTTTGCTACCTAAGATGTTCAGTTTGGAAAATAAAGGTGGCATGAAAAGTGACCATCAAGATGATGGTAAGGAGCAGCTGAAGAATGCGTTGGCTGAACTGGAACAGATACTAATACACAACAACTTACCTTACCCTGTTTATTTTGCTTATGAGGATGACAACATTCATGCTGTGTTAGCTGATATCAAGAAAAATGATGCCACTGGCCAGCCTGCTACTGCAACTAATGGCGGATACAAGTTTGTTGTTTCAGCTCCAGAACCAAAGAAAGTTGCATCTCCCTCAATTACAAACATTCAGGGATGGTTGGCAGGAAAGAAGACTGATGATGACGCTAGTCAATTACCCACCATTGCTATAGTGGCATCGTATGACACTTTTGGGGCTGCTCCTGCATTGTCAGTGGGAAGTGATAGTAATGGAAGTGGTGTTGTGGCTCTCCTCGAAGTAGCCAGGTTGCTTTCTCTCCTCTATTCTAATCCAAAGACAAGAGGACATTACAATGTACTCTTTGGACTGATGTCTGGCGGGCCATACAACTACAATGGAACTCGTAAGTGGCTTCGCAGCTTCGATCAACGTATGCGTGAAAGCATTGACTATGCTATCTGCTTGAATAGTATTGGTTCATGGGAAAATGATTTGTGGATTCATGTGTCTAAGCCACCAGAAAATGTCTACATAAAGCAAATTTTCGACGATTTTTCTATCGTGGCAGAAGAGTTGGGCTTTACTGTTAATTTGAAGCACAAGAAAATAAATATTTCGAATCCTCGAGTAGCTTGGGAGCATGAACAATTTTCTAGGCTGAGAGTTACTGCTGCCACCCTCTCTGAACTCTCCACTGCACCTGACTTGCTAGAAAGGACTGGGGGCCTTGTTGACAGCAGGCCTTTTGTCAATGAAACAGCAGTTGTCAGAAGTGTGAAGTTAATTGCTGAGAGTCTTGCGAGACATATCTACAGACATGAAGGAAAGAATATTCGGGTATTTGCAGACAACAGTAGTTTGGCTGTAAATCCTTCTTATATTCGATCCTGGTTAAATGTGTTGTCCCAAACACCTCGGGTTGCACCATTTCTGCCAAAAGACGATCCTTTTGTCGCAGCACTGAAAAAGGAATTAGAAGATCACACTGACCAGGTTGATCTGCATCGGGATGTGCTAGATGGGATGTTCACTTTCTATGATTCAACTAGGGCAATGCTTAATGTATATCAGGTCGCCAGTGTCACATTTGACCTTCTGTTGCTGTTAGTATTGGGGTCGTATTTAATTTTGCTCTTCAGTTTCTTGGTCATCACAACTAGGGGCCTTGATGATCTAATCAGCTTATTTCGACGGCCTCCCTCACGAAAAGTGAAGACTGCATAG 1704 0.4407 MIMAPRKAHERQLLVESMYSVIALLFLLVTCVELCDAATVVDVYRLIQYDMSGAPFGSRLASLNHHAGSLHFSPHADLSRTVLVIPLRELNMTFVKEYIVEKKPLGGLLFLLPKMFSLENKGGMKSDHQDDGKEQLKNALAELEQILIHNNLPYPVYFAYEDDNIHAVLADIKKNDATGQPATATNGGYKFVVSAPEPKKVASPSITNIQGWLAGKKTDDDASQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLLSLLYSNPKTRGHYNVLFGLMSGGPYNYNGTRKWLRSFDQRMRESIDYAICLNSIGSWENDLWIHVSKPPENVYIKQIFDDFSIVAEELGFTVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPDLLERTGGLVDSRPFVNETAVVRSVKLIAESLARHIYRHEGKNIRVFADNSSLAVNPSYIRSWLNVLSQTPRVAPFLPKDDPFVAALKKELEDHTDQVDLHRDVLDGMFTFYDSTRAMLNVYQVASVTFDLLLLLVLGSYLILLFSFLVITTRGLDDLISLFRRPPSRKVKTA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0636 567 ProSitePatterns EF-hand calcium-binding domain. 248 260 IPR018247 -
Prci6g0636 567 PIRSF Nicalin 3 562 IPR016574 GO:0009966|GO:0016020
Prci6g0636 567 Pfam Nicastrin 228 365 - -
Prci6g0636 567 SUPERFAMILY Zn-dependent exopeptidases 188 392 - -
Prci6g0636 567 CDD M28_nicalin_like 140 431 - -
Prci6g0636 567 Gene3D Zn peptidases 133 428 - -
Prci6g0636 567 Coils Coil 478 498 - -
Prci6g0636 567 PANTHER NICALIN 12 567 IPR016574 GO:0009966|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0636 Prci-Chr6 4176882 4183679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0636 7 565 EF-hand Containing Proteins AT3G44330 71.377 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0636 K26499 - gmx:100778865 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0636 6 4176882 4183679 Prci6g0636 6 4176882 4183679 ECH