Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0629 ATGACTCGGATTTTGGTTCAGCGGGGTTCTTCTGGCAATTCTTCGTCAAACCCAAGTCGTTCTGCTCTGTCCGGTTCTTCTTCAACTCGGGTAGAGCCACCTGCAACAGTTCCCCAGGCTCATTCGACTGTGAGAGATGAGGACAGTGGACAGGAGGTACCGGACATACTTGTTGACAACGAGCTTTTGGATTATTCAGGGAGTAGTGACGGTAAGACAAAGAACGACGATCATTTGGTAGAAAATCTTCATTATGGGCAGAATGACACTCCAAGTGATGAAATAGCTGACGTTGAGAAACCTGTTAAGGAGGAGTTAGCGGCTGCGCGAGAATATGACCATAGGTTGTGTGGATTGAAAATTTCAGAAAGACTTGCATCAGGAAGCGAGGGTTCAAGCGGTGGTTCGTTGCGCAGTGCTAACAGTACTCCAAATCCACCGCCTCCTCCTGTTCCTCCTCCAAAACCGTCACCGCCTAACTTGAGTTCAAAGAAAAATGTGTCATCAAATCCAAATGCTGTCCAAATAGGACCATCTCGAAGAGCATCTGCGTGGCCTGTTGTTTCAGCCAGGACTTCACCTGCTGGGTCTCGACCTACTTCCCCTAAGTCTCTTAATGAGAATGAGGGCTACAATAGCGCTGACGAACAGAATCCATGCTTCCCATCCTCTTATGATGATTTAGAGAGAGAGCGGCAATTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAGAATGATGGAGGATGGAAACTGTCTTTTTCGTGCAGTTGCAGACCAGGTGTATGGGGACTCTGAATCATATGATTTGGTCCGACAGATGTGCATAGACTATATGGAGCGGGAAAGAGACCACTTTTCTCAATTTATCACTGAAGGCTTCACGTCTTACTGTAAGAGGAAGAGAAGAGATAAGGTCTATGGAAACAATGTTGAGATCCAATCCTTGTGTGAGATGTACAATCGTCCCATTCATATATACTCTTACACTACAGAACCTATCAATATCTTTCATGGAAGTTATGACACTGACACACCACCTATTCGACTGAGTTATCATCATGGGAATCATTACAACTCTCTTATTGACCCACGACGCATGACAGTTGGTGCAGGACTTGGGTTTAGCTGCCTACGTGGGACGAATGTTGACAAAGATCAAGTCAAGGCTGCAATTAAAGCTCAACAAGACCAACAGATTGATAATGCACTTTTGGCAGAGGGACGGTTTTACTCTGATCTCGAGCTTACAGAAAAGGAGATTGAGCGCATGGTGATAGAAGCTTCTCGGGCTGAATATCTTGCTGATGTTACATTTAAGCAGCAGCTTGCCCATAGTGAATCCTCAACTTCAAATGCCGAGCCATCATCTTCTGGAGCAACAGGATCATCAGGTGCAGATGGCAAGACGGAGATTGGGAAAGAGCGAGATTCAAATATTAGCAACGGCATACAGATGTTGCTATCCATGGGATTCAGCTACCTGCAGGCGATAGAGGCTTATAGCATATTTGGGGATGATGTGGATTCTATGGTTTGTTACCTCTTGGAAACCAGCAGTAGCAGCAGACGAAAAGGCAAGGCCACCGAATGA 1602 0.4532 MTRILVQRGSSGNSSSNPSRSALSGSSSTRVEPPATVPQAHSTVRDEDSGQEVPDILVDNELLDYSGSSDGKTKNDDHLVENLHYGQNDTPSDEIADVEKPVKEELAAAREYDHRLCGLKISERLASGSEGSSGGSLRSANSTPNPPPPPVPPPKPSPPNLSSKKNVSSNPNAVQIGPSRRASAWPVVSARTSPAGSRPTSPKSLNENEGYNSADEQNPCFPSSYDDLERERQFEIDIRRAKGYEVKRMMEDGNCLFRAVADQVYGDSESYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQSLCEMYNRPIHIYSYTTEPINIFHGSYDTDTPPIRLSYHHGNHYNSLIDPRRMTVGAGLGFSCLRGTNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERMVIEASRAEYLADVTFKQQLAHSESSTSNAEPSSSGATGSSGADGKTEIGKERDSNISNGIQMLLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETSSSSRRKGKATE 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0629 533 PANTHER OTU DOMAIN CONTAINING PROTEIN 147 375 - -
Prci6g0629 533 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 478 521 IPR015940 -
Prci6g0629 533 SUPERFAMILY UBA-like 485 520 IPR009060 GO:0005515
Prci6g0629 533 Gene3D - 226 377 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 448 479 - -
Prci6g0629 533 SUPERFAMILY Cysteine proteinases 232 367 IPR038765 -
Prci6g0629 533 ProSiteProfiles OTU domain profile. 244 367 IPR003323 -
Prci6g0629 533 CDD OTU_plant_OTU6-like 240 366 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 161 177 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 1 36 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 193 220 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 126 141 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 1 97 - -
Prci6g0629 533 Pfam OTU-like cysteine protease 252 361 IPR003323 -
Prci6g0629 533 MobiDBLite consensus disorder prediction 142 160 - -
Prci6g0629 533 FunFam OTU domain-containing protein 5 225 377 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 448 468 - -
Prci6g0629 533 MobiDBLite consensus disorder prediction 125 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0629 Prci-Chr6 4155811 4162575 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0629 K12655 - jre:109005170 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0629 6 4155811 4162575 Prci6g0629 6 4155811 4162575 ECH