Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0558 ATGGCTAACATGAGGGGTGTTTCTTCAAGTCCTCTGGGGCGATCAAAGAAAACGGCAGAAATAATCTGGGAAGCTCGCGAACCGCAGATAATTACAGAATATGATTTGAGGGAAATCGATTTATATTCATTTCAAGGCCTCTTAAAGCATGAGGGGAAAGAAAGATTTGGTCCAGTTTATCGCCAATGGCAAGTTGATGCGGCAAATTTCAACGTGGATGGTCATTATCCGGTGAGAGAGCTATGGGATCGTGCCAGGGGCTGCTGGGCTAAAATCTTAGCTCATGATAGCAGGTCCATTCTTGTGGTTGCTCACAACGCTGTCAATCAGGCTCTTGTTGCAACGGCAATTGGTTTAGGGACTGAGTACTTCAGAAATTTACTTCAGAGCAATTGTGGTGTGAGTGTCCTTGATTTCATCCCAAGGTCCGAGGGTGGCTCTCCACATATTTGCCTCAATCGATTAAATCAGACCCCTGGTTCGCCTGTTACTGGTGGGAAATCTGGAGGTAGAAAGACAAATAAGCAGATAATACTTGTTTGTCATGGTTATACACAAGGCAATGCAGAGGATGGTTTTCTTTTGGCTGGTGATCAACAATTGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAATTCCATAATTAGGAGTCCTAACAAAGCCTGTATCGGGACAGCAAATGCCATCTCCCAAGTGCAAGAAGCTGCTGATTGCCTGGGTGCTGACTGTGTGCCACGCTATGTTGAGATGAAGCAGATGGAGAACTTGGATGTTGAAACAATCTATCAGCAATCCAAGGATATATCAAATTTTGCGGCTATTCACCCGGGCTGGTTAAATAAGATTGACGATGGGGTGAGAACAGCGTTATGGAATCAGTCTGGAAAGGCATGGCAATCTCTGTTAGAGGAACTATCGGATGAACCATCATCTTCAGAAGTTGTGGTTGTAGTTGGCCATCCCGCCATCCACATAGCACTCATGGGGCACTGCTTAAATGTGACAAAAGAATGGTTGGGATCATTTCATCTTGATGCAGGGAGCGTTAGTGTCCTTGACTTCCCTGATGGACCCAAAGGAAGAGGCACTATCCGGTGCATAAATTATACTGCCCATTTGGGAAGATGGTCCATACCTATCACGAGATCAACAGAGGACAATGAAGAGTTTTAA 1203 0.4472 MANMRGVSSSPLGRSKKTAEIIWEAREPQIITEYDLREIDLYSFQGLLKHEGKERFGPVYRQWQVDAANFNVDGHYPVRELWDRARGCWAKILAHDSRSILVVAHNAVNQALVATAIGLGTEYFRNLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPVTGGKSGGRKTNKQIILVCHGYTQGNAEDGFLLAGDQQLNMLGVIQSQKSAELLLDLKVNSIIRSPNKACIGTANAISQVQEAADCLGADCVPRYVEMKQMENLDVETIYQQSKDISNFAAIHPGWLNKIDDGVRTALWNQSGKAWQSLLEELSDEPSSSEVVVVVGHPAIHIALMGHCLNVTKEWLGSFHLDAGSVSVLDFPDGPKGRGTIRCINYTAHLGRWSIPITRSTEDNEEF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0558 400 SUPERFAMILY Phosphoglycerate mutase-like 7 153 IPR029033 -
Prci6g0558 400 Pfam Histidine phosphatase superfamily (branch 1) 6 140 IPR013078 -
Prci6g0558 400 Pfam Histidine phosphatase superfamily (branch 1) 177 367 IPR013078 -
Prci6g0558 400 Gene3D - 3 144 IPR029033 -
Prci6g0558 400 Gene3D - 168 387 IPR029033 -
Prci6g0558 400 CDD HP_PGM_like 9 139 IPR013078 -
Prci6g0558 400 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 173 367 - -
Prci6g0558 400 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 168 387 - -
Prci6g0558 400 SUPERFAMILY Phosphoglycerate mutase-like 175 388 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0558 Prci-Chr6 3695900 3699308 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0558 K22200 - gmx:100794084 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0558 6 3695900 3699308 Prci6g0558 6 3695900 3699308 ECH