Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0555 ATGCAGTCTCTCTCCTCTCACCCTTCCCATTCTCTCAACTACCTCTCCCATACCCGCACCTCCGCTTATCGGGCTGCTCCGACCCGCTTCTCCGTCAACTGCGCTTATGGCTTCGATTCCGGCGGATTGTGTTCCGGTTTCGCCTCCCGGGCTGACTGGCAGAGTTCCTGCGCCATCTTAGCTAGTAAGGTCGTCTCTCAGGAGCAGTCCTCCACCGATGCCAACGGTGGCACTGCCGACCACGTCGCCGCCATCAACGGCCATAAGGCCGCCGTAACGGATCTCAACCTTGTCCACATCGGTAATTTAGAAGGTAGCGACGCTAATAAGCCGCTCCCGCCAAAGCCGCTCACTATTTCGGATCTCTCCCCCGCTCCGATGCATGGCTCGCAGCTCCGCGTGGCTTACCAGGGCGTTCCCGGAGCATACTCCGAAGCGGCTGCCGGCAAGGCCTATCCGAACTGTGAAGCCATTCCTTGTGACCAGTTTGAGGTGGCCTTCCAGGCTGTGCAGCTCTGGATCGCCGATCGAGCGGTTCTCCCTGTGGAAAACTCCCTTGGCGGCTCGATCCACCGGAACTACGACCTCCTCCTCCGCCACCAGCTCCATATCGTCGGGGAGGTCCAGCTTCCCGTGCACCACTGCCTTCTCGCGCTCCCGGGTGTTCGGAAAGAATATCTAACCCGCGTCATCTCGCACCCGCAAGCCCTCGCCCAGTGCGAGCACTCGCTAACCAAATTCGGCCTCAACGTGGCACGTGAGGCCGTGGACGACACCGCCGGTGCGGCGGAATTCATCGCAACCAACAACCTACGCGACACGGCGGCAATTGCTAGCGCACGCGCGGCGGAGCTGTACGGATTGCAGGTCTTGGCAGATGGGATCCAGGACGACCCGAGTAACGTGACCCGATTCGTGATGCTGGCCCGGGAACCCATAATTCCGCGCACGGACCGGCCCTTCAAGACAAGCATAGTCTTCGCTCACGATAAGGGGACGTCGGTACTGTTCAAGGTTCTATCGGCCTTCGCTTTCAGGAACATTAGCTTGACGAAGATCGAGTCAAGACCTCACCGGAGCCGCCCGATTAGGGTGGTGGACGATGCGAATGTGGGGACGGCGAAGCACTTCGAGTATATGTTCTACGTTGATTTCGAAGCTTCCATGGCAGAGGTCAGGGCGCAGAATGCCTTGGCAGAGGTTCAGGAATTCACTTCCTTCCTGAGGGTGTTGGGGAGCTATCCCATGGACATGACTCCATGGAGCCCCTCTTCTTCCTCTTGTCCCAGGGGAGATTAG 1299 0.592 MQSLSSHPSHSLNYLSHTRTSAYRAAPTRFSVNCAYGFDSGGLCSGFASRADWQSSCAILASKVVSQEQSSTDANGGTADHVAAINGHKAAVTDLNLVHIGNLEGSDANKPLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVQLWIADRAVLPVENSLGGSIHRNYDLLLRHQLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCEHSLTKFGLNVAREAVDDTAGAAEFIATNNLRDTAAIASARAAELYGLQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRSRPIRVVDDANVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSSSCPRGD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0555 432 ProSitePatterns Prephenate dehydratase signature 2. 350 357 IPR018528 GO:0004664|GO:0009094
Prci6g0555 432 ProSitePatterns Prephenate dehydratase signature 1. 286 308 IPR018528 GO:0004664|GO:0009094
Prci6g0555 432 FunFam Arogenate dehydratase 216 298 - -
Prci6g0555 432 ProSiteProfiles ACT domain profile. 324 415 IPR002912 -
Prci6g0555 432 SUPERFAMILY Periplasmic binding protein-like II 133 316 - -
Prci6g0555 432 SUPERFAMILY ACT-like 305 417 IPR045865 -
Prci6g0555 432 Gene3D - 217 298 - -
Prci6g0555 432 FunFam Arogenate dehydratase 317 418 - -
Prci6g0555 432 CDD PBP2_Ct-PDT_like 133 312 - -
Prci6g0555 432 Gene3D - 317 418 - -
Prci6g0555 432 ProSiteProfiles Prephenate dehydratase domain profile. 133 310 IPR001086 GO:0004664|GO:0009094
Prci6g0555 432 Gene3D - 128 216 - -
Prci6g0555 432 FunFam Arogenate dehydratase 128 215 - -
Prci6g0555 432 Pfam Prephenate dehydratase 134 312 IPR001086 GO:0004664|GO:0009094
Prci6g0555 432 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 35 424 - -
Prci6g0555 432 CDD ACT_CM-PDT 322 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0555 Prci-Chr6 3653979 3655987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0555 K05359 - qsa:O6P43_028484 725.702