Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0548 ATGAGCTCTCTGCTTCCGACCTCCAAAGTCGTCCGCGACGGAGCAGAGAACCCAACCACAAGTTCTGTACAGCTTGATCTCCCTCACAAGCATGTCGCCGATGCCGGAGCCCTCTTTGTTCTTAAATCTAAAGGATCGTGGGTGCACTGTGGTTACCACCTCACGACGTCCATAGTAGCTCCGCCATTGCTGAGTCTTCCCTACGCCTTCACGTTCCTGGGGTGGACAGGTGGCGTCATCTGCTTGGTTGTTGCTGCTCTCGTCACTTTCTATAACTACAATTTATTGTCCCTGGTCCTTGAACACCATGCTCACCATGGTCACCGCCTTCTCCGATTCAGAGACTTGGCTCACCATATTTTAGGGCCCGCATGGGGTCGGTATTTTGTGGGGCCAATTCAATTCGCGGTCTGCTACGGTGCTGTTGTGGCGTGTACTCTTCTGGGAGGACAGTGCATGAAGGCAATTTACGTGGTGGCAAACCCTAGCGGGAGCATGAAGCTGTACGAGTTTGTGTTGATATTCGGATGCTTGATGCTCATATTAGCTCAGCTCCCATCGTTTCACTCTCTGAGGCACATCAATATGGTGTCCCTGCTCCTCTGCCTTGCCTACAGTGCTTGTGCTACTGGCGCTTCCATTTATATTGGCGACTCTTCTAAAGGCCCGCGAAAAGATTATTCTCTGCAAGGCGATACGCAGACTCGTCTGTTCGGAATCTTCAATGCTATTGCCATCATTGCCACCACTTACGGAAATGGAATCATTCCAGAAATCCAGGCAACATTGGCGCCCCCTGTGAAGGGGAAGATGTTCAAGGGATTGTGTGTTTGTTACTTGGTACTTACATTGACGTTCTTCAGCGTTGCAATCTCTGGTTACTGGGCATTTGGGAACCATGCTGCTAGCCTCGTCTTAAACAACTTTGTTGATAACGGGACGCCTTTGGTGCCCAGATGGTTTATTTATATGACCAACATTTTCACCATAGCTCAGCTGTCAGCTGTTGGGGTGGTTTACTTGCAGCCAACGAATGAAATGATGGAGCAAGCGTTTGCGGACCCACAAAGCGCAGAGTTTTCAATGCGCAATGTGATCCCCAGAGTGATCTCTCGGTCATTGAGTACTGCTCTGGCCGTTGTTATAGCAGCGATGCTTCCATTTTTCGGGGACATAAACGCACTCATTGGTGCTTTTGGTTTCACTCCACTTGACTTCATCTTGCCTGCGATTTTCTTCAACCTCACTTTTAAGCCATCCAAGCGAAGCCCCATTTTCTGGCTGAACGTCATTATTGCTGTCACTTTCTCTGCTTTGGGAGCTATAGCAGCCATTGCAGCAGTCAGACAAATAGTCCTTGATGCTAAAAATTACAGATTGTTCGCTAATGTATAA 1395 0.4875 MSSLLPTSKVVRDGAENPTTSSVQLDLPHKHVADAGALFVLKSKGSWVHCGYHLTTSIVAPPLLSLPYAFTFLGWTGGVICLVVAALVTFYNYNLLSLVLEHHAHHGHRLLRFRDLAHHILGPAWGRYFVGPIQFAVCYGAVVACTLLGGQCMKAIYVVANPSGSMKLYEFVLIFGCLMLILAQLPSFHSLRHINMVSLLLCLAYSACATGASIYIGDSSKGPRKDYSLQGDTQTRLFGIFNAIAIIATTYGNGIIPEIQATLAPPVKGKMFKGLCVCYLVLTLTFFSVAISGYWAFGNHAASLVLNNFVDNGTPLVPRWFIYMTNIFTIAQLSAVGVVYLQPTNEMMEQAFADPQSAEFSMRNVIPRVISRSLSTALAVVIAAMLPFFGDINALIGAFGFTPLDFILPAIFFNLTFKPSKRSPIFWLNVIIAVTFSALGAIAAIAAVRQIVLDAKNYRLFANV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0548 464 Pfam Transmembrane amino acid transporter protein 44 449 IPR013057 -
Prci6g0548 464 PANTHER OS05G0424000 PROTEIN-RELATED 46 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0548 Prci-Chr6 3553260 3556110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0548 136 464 Organic Solute Cotransporters AT1G08230 65.257 6.44e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0548 - - aip:107613925 750.74