Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0520 ATGCAGCCCAATTTGTTCCCCTTTGGAAGCTTTCAGGGAAATCCGTTCGTATTCAATGGTGATTTGAGTGAGGGGTTTGAGACCTCTAGGGTTTTCTTCTTAGTTCCTTTCTTGCTCTTCCAGGGAGGGGGAATGGATTTGTCCAAGGTCGGAGAAAAGATCCTGAGCTCTGTTAGGTCTGCGAGATCGCTTGGACTGCTCCCCTCTGTTTCTGATCGGCCCGAGGTTCCAGCTAGAGCTGCTGCTGCTGCCGCTGTTGCTCGTGCTCTTGCGGGATTGCCTCCTCACCAGCGGTATAGCCTCTCATCAAGTTCCGAAGAACTGAGTTCTATATATGGAAGCAGAAATCATGGTGAAGAAGTAGAGGAGCTTGAGGATGAATTCTATGAGGAGGATTTTGATCCAGTCAAGTATGTTTTAGAGCATGCTCCTGCTGAAGAAAGTGAGCTTGCACACTTTGAGAAACAGGCCGCTCTTAGATTGGCACAGTTGGATAGAGTAGCAGAGTGTTTATCTCGCCACGTAATGAAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTTAGGGAACTGGAAAAAGACTTGAGGATTGCCAACGTCATCTGCATGAATGGAAGAAGACATTTGACCTCATCTATGAATGAAGTTTCAAGGGATCTCATTGTAAATTCGTATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAATTTTGACTGAGCTTCAACGTGCATTGGAGATGCAATCAACACTTGAATTACTTGTTCAGGAGGGGAATTATTGCAAGGCATTTCAAGTGCTATCTGAGTTTCTGCAACTTTTAGACAGTTTGTCAGAGCTTTCAGCAATACAGGAGATGACTCGTGGTGTGGAGGTTTGGCTGGGAAAAACTCTACAAAAGCTGGATGCTCTTTTGTTGGGAGTTTGTCAGGAATTCAAGGAAGATAGCTATCTAACTGTTATTGATGCCTATGCATTAATCGGGGATGTTACTGGTCTGGCTGAAAAGATACAAAGTTTTTTCATGCAAGAAGTTATCTCGGAAACCCACTCTGTGTTGAAGGCTGTTGTGTATGAGGATGAGGAGGCACCTTTGCAAAATAGTAGGCTCACTTACAGTGACTTATGCCTTCAGATATCCGAATCTAAGTTTAGGCCATGCTTATTAAGAACATTAGCTGTTCTGTTTGAGCTTATGCATTCATACCATGAAATCATGGAGTTTCAGCTGGATAGACAGGTCGCAGCAGGCCAAACTTCAAATAAAGACAATGATGTTTCCTGTAGTCCATGCGGGGCTGGGGAGGCTGATGCAGATGTAAGAACTCGTAGCATCTCTTTTTCCGGTTCTGGAGATGAGATTCATGGTTCATCTTCAAGAGGAGAATCTGAAACAGCCAGCTCACTGGTTGAAACTTCCAACACTACTGGTTTACCATGTATAGATTCTCTCGATCCAGTTAATGAGTCTAGAAAGGAGGATAATGCAGCATCAAGTATTGAGTCCCCTTGGTACCATCTGCGCAAAGAAGCTACAGAATTTGTTTCACAGACCCTTAAAAGAGGGCGCAAGAATCTTTGGCATCTCACTACTAGCCGTGTTTCAGTATTGCTTTCTTCTGATGCAGCTTGTACCACAAGCATTCACCAATTCTTGAAAAATTATGAAGATCTCAGTATCTTCATTTTGGCTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAGTTTAGGCAGAAGTTGAAGGTGGTTTGTGAAAACTATTACATTACTTTTCATCGACAAAACGTTCATGCACTCAAAATGGTTTTGGAGAAAGAGATGTGGTTAAAATTACCACCAGATACAGTGCAAATGATCAGTTTTTCTGGACTAGTTGGTGATGGAGCACCTTTGATTTCTTTGTCTAACCGCAAATCAATTAATCCCAGTGGAGTTGACTCTGATAGATTAGTAAACTTGGTTCACAGTCGCAACAGCTCTAGGGAAAGTGGGTTCTCTTATTGGCTTAGAAATGGAAACCCATTTTTGCAGAAATTATCAACCTCTAGAGAAGGTCATTGTTTCTTCCAATCTAATGGATCACCTTATGGTGAACTTGATGGAAATTCGAACAGCAGTTTGTATGGCGATAAATTTTTGCCTGGAAAGAATGATTCCAGTCAAATGAATGGTGCTAATTCAATTTCAGAAGATGAAAATGAGGATCTTCTTGCAGACTTTATCGATGAAGACAGTCAACTTCCAAGTCGAAGTTCAAAACCCAATCATCCAAGAAGAAAGTCATTACATTGTAATGATGAAGAAAATACAGCGCAAACTGGTTCTTCTCTAAGTCTCTTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATTTGTCAGTTATTTGAGATTTTTTTCAATTTTGTATATGAAACATTTGGTCAGCATAACACTGGTTTCAATGGAAAAGGTTCGTCCGATTATCTTAATTATCAGCTAAGGACAGCCTTATCTAAAATAGCGCAAGATTGCGATCAGTGGATAAAGCCCCCGTCATCTTCACCTACTTCATCATTTGTACATTCAGAGGTAACACCTGCTGGCCCTCGCTCAAATTCGGGTAACTCTGCAGTGACATCTTTGGGTCTTAAGGAAAGATGTGTGGCTGTTGACACTATATCATTTGTTGCTCGAATATTGAATAGATCCAAATCTCATCTCCAATCAATGCTTTTGCAAAGTAACGCTACTGTACTTGAGGATTTCTATCTGCATCTGGTGGATGCGGTACCAGATCTAGCAGAGCATATTCATAGGACAACAGCTAGACAACTACTGAACATCAATGGGTATGTTGAACGTGTTGCCAATTGTAGATGGGAAGTAAAAGAGCTTGGGCTTGAGCATAATGGGTATGTTGATTTGTTGCTTGGAGAATTTAAGCACTATAAAACACGTCTTGCTCATGGGGGAATTCGTCTAGAGATTCAAGACCTCCTACTGGAATACGGGCTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTTAAGAGATGTAGTGACGAAGGACGAGCTTTAATGTCATTGGATCTGCAGGTTTTAATCAATGGACTGCATCATTTTGTGTCCATGAATGTGAAGCCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTATCTTCCAGAGACAGAATTTGTGCACTGGGCCCGTGCGCACCCCGAATACACTAAAAGTCAGATTATTGGGTTGATAAACCTTGTTGCTTCGATGAAAGGTTGGAAGAGAAAAACCAGGTTGGAAGTCTTGGAAAAGATTGAGTGA 3360 0.4152 MQPNLFPFGSFQGNPFVFNGDLSEGFETSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRNHGEEVEELEDEFYEEDFDPVKYVLEHAPAEESELAHFEKQAALRLAQLDRVAECLSRHVMKHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPILTELQRALEMQSTLELLVQEGNYCKAFQVLSEFLQLLDSLSELSAIQEMTRGVEVWLGKTLQKLDALLLGVCQEFKEDSYLTVIDAYALIGDVTGLAEKIQSFFMQEVISETHSVLKAVVYEDEEAPLQNSRLTYSDLCLQISESKFRPCLLRTLAVLFELMHSYHEIMEFQLDRQVAAGQTSNKDNDVSCSPCGAGEADADVRTRSISFSGSGDEIHGSSSRGESETASSLVETSNTTGLPCIDSLDPVNESRKEDNAASSIESPWYHLRKEATEFVSQTLKRGRKNLWHLTTSRVSVLLSSDAACTTSIHQFLKNYEDLSIFILAGEAFCGIEAVEFRQKLKVVCENYYITFHRQNVHALKMVLEKEMWLKLPPDTVQMISFSGLVGDGAPLISLSNRKSINPSGVDSDRLVNLVHSRNSSRESGFSYWLRNGNPFLQKLSTSREGHCFFQSNGSPYGELDGNSNSSLYGDKFLPGKNDSSQMNGANSISEDENEDLLADFIDEDSQLPSRSSKPNHPRRKSLHCNDEENTAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFNFVYETFGQHNTGFNGKGSSDYLNYQLRTALSKIAQDCDQWIKPPSSSPTSSFVHSEVTPAGPRSNSGNSAVTSLGLKERCVAVDTISFVARILNRSKSHLQSMLLQSNATVLEDFYLHLVDAVPDLAEHIHRTTARQLLNINGYVERVANCRWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRLEIQDLLLEYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEFVHWARAHPEYTKSQIIGLINLVASMKGWKRKTRLEVLEKIE 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0520 1119 MobiDBLite consensus disorder prediction 449 497 - -
Prci6g0520 1119 Pfam Vacuolar-sorting protein 54, of GARP complex 121 410 IPR019515 -
Prci6g0520 1119 MobiDBLite consensus disorder prediction 449 483 - -
Prci6g0520 1119 PANTHER UNCHARACTERIZED 45 1119 IPR040047 GO:0032456|GO:0042147|GO:1990745
Prci6g0520 1119 MobiDBLite consensus disorder prediction 746 778 - -
Prci6g0520 1119 MobiDBLite consensus disorder prediction 860 883 - -
Prci6g0520 1119 Pfam Protein of unknown function C-terminus (DUF2451) 889 1119 IPR019514 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0520 K23288 - gmx:100803274 1708.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0520 6 3373932 3390250 Prci6g0520 6 3373932 3390250 ECH