Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0519 ATGGAAAACCTCTGCGTCCTCGTCGTCCCTCTTCTGTTCTTTGGTCTCCTTCTTCACGCAGGAACTGCTACAGCTCTTGGAAACCAAGATGGATCAGAGGAATGGGGATATGTTCAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTTTACAGAAGTCCCTACAGAGTGGAACATCCCTCCAAGCCATGGCCTATCATTCTCTGGTTGCAGGGAGGACCTGGTGCTTCAGGGGTTGGGATTGGGAATTTTGAGGAGGTTGGACCTTTAGATACCAATTTGAAGCCAAGGAACTCCACATGGCTTCAAAAAGCAGATCTCTTGTTTGTGGATAACCCAGTTGGGACAGGGTTCAGCTTTGTGGAACACAAAGACCTCTTCGTGAAAACAGACGAGGAAGCAGCCACTGACCTGACGACATTGTTAATTGAGATATTTAATCGAAATGAGAGCCTCCAAAAGAGTCCCCTGTTCCTCGTGGCAGAGTCATATGGTGGAAAATATGCGGTCACTCTTGGCTTATCTATTCTTAAAGCTATTGAAGCAAGGAGATTGAAACTCAAACTTGGAGGTGTGGCATTAGGGGACAGTTGGATCTCCCCTGAAGATTTCGTGTTCTCATGGGGCCCTCTTCTTAAAGACGTCTCAAGACTTGATGACAATGGGCTGCAAAAATCAAACAGGTTAGCGAGGAAGATCAAGAAACAAATTGAGAAGGGAAAATTTGTTGAAGCAACCAGGTCATGGAGCGAACTTGAGAATGTCATTACCGCAAACAGCAACAATGTGGACTTCTACAATTTCCTGCAGGATTATCAAAGCAATTCTCCAGCTTTGTCAGCAACGGCGGAGCTGGGATCGTACAGAGAAATAGCACTGAAACGATACTCAAACTATCTAACTTCAAAGAAGTCATCTTCTGGTGGTGGTCTTGGAAGCTTGTTAAATGGTGTCATAAAGAAAAAGTTAAAGATCATTCCTGAAAATGTTAGATGGGTAGGACAGTCCCGTAGGGTTTTCGCAAACCTTCAAGGTGATTTCATGAAACCCAGAATTAATGAGGTCGATGAGTTGTTAGCTAAGGGAGTCAATGTGACTGTGTACAATGGACAAGTTGATCTGATCTGTGCAACAAAGGGAACTGAAGCTTGGCTTAAGAAACTCAAGTGGGAAGGGCTTAAGAGTTTCTTGAAGAAGGATAGAATACCTCTCTACTGTAAAAATGACCAAGGCACGAAAGGCTTTGTGAAGTCATACAAAAACCTGCACTTTTATTGGATTCTTGGAGCTGGTCATTTTGTACCCACTGATCAGCCTTGTGTAGCATTAAACATGGTGGGTGGGATTACACAGTCACCAGCAGCTTCTTAA 1371 0.4427 MENLCVLVVPLLFFGLLLHAGTATALGNQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEHPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTNLKPRNSTWLQKADLLFVDNPVGTGFSFVEHKDLFVKTDEEAATDLTTLLIEIFNRNESLQKSPLFLVAESYGGKYAVTLGLSILKAIEARRLKLKLGGVALGDSWISPEDFVFSWGPLLKDVSRLDDNGLQKSNRLARKIKKQIEKGKFVEATRSWSELENVITANSNNVDFYNFLQDYQSNSPALSATAELGSYREIALKRYSNYLTSKKSSSGGGLGSLLNGVIKKKLKIIPENVRWVGQSRRVFANLQGDFMKPRINEVDELLAKGVNVTVYNGQVDLICATKGTEAWLKKLKWEGLKSFLKKDRIPLYCKNDQGTKGFVKSYKNLHFYWILGAGHFVPTDQPCVALNMVGGITQSPAAS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0519 456 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Prci6g0519 456 FunFam Carboxypeptidase 18 454 - -
Prci6g0519 456 Gene3D alpha/beta hydrolase 20 454 IPR029058 -
Prci6g0519 456 SUPERFAMILY alpha/beta-Hydrolases 26 452 IPR029058 -
Prci6g0519 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 439 IPR001563 GO:0004185|GO:0006508
Prci6g0519 456 Pfam Serine carboxypeptidase 30 447 IPR001563 GO:0004185|GO:0006508
Prci6g0519 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Prci6g0519 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Prci6g0519 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Prci6g0519 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0519 Prci-Chr6 3368185 3372740 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0519 K09646 - qsa:O6P43_028451 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0519 6 3368185 3372740 Prci6g0519 6 3368185 3372740 ECH