Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0516 ATGGCTCCAAAGCGGGCTGAGAGAATCGTGGTCAAATCCGCCAGAAGAGTTGTGGAAGAAAGCACGGTTCAAGTCTCCGTTGTTAGCAGCACCAAAAGATCAACGAGAGCAAACAAAGACGCCGAATCAGAAGAAGCAAACAAAGACCGTGTGAGAACCATTCCTGTTCAAACCCCACCTGATGAAAATGCAAGTGACACTAGGGAAGACCCTGAACAGAAAAGAGAGCGAGAAAAAACCCAAAATATTGCTGAAAAGCCAATAAAAGAAGGAAGTGAAGGGAAAGGTAGTGGAAACAAAGGAGTGAAAAGGAAGAGAAAGAAGGTGGGGAGAAGTGGAGAAGGGTACAGGAGGTACGTGTACAGAGTACTGAAGCAAGTTCACCCTGAGATGGGAATTTCATTTCAGGCCATGACCATTCTGAACAATCTGATGACTGATATGTTTGAGAGGCTTGCGGATGAAGCTACGAGGCTGAAGACGTACACGGGACACATGACATTGTCGTCAAGGGAGATTCAAGGGGCAGTGAAGCTGGTTCTGCCCGGAGAGCTTGGCAGGCATGCCATTGCTGAGGGTGCCAAAGCTGTCACCAATTATATGTCCAGCGATGCTGCTCGTGACTAG 627 0.4785 MAPKRAERIVVKSARRVVEESTVQVSVVSSTKRSTRANKDAESEEANKDRVRTIPVQTPPDENASDTREDPEQKREREKTQNIAEKPIKEGSEGKGSGNKGVKRKRKKVGRSGEGYRRYVYRVLKQVHPEMGISFQAMTILNNLMTDMFERLADEATRLKTYTGHMTLSSREIQGAVKLVLPGELGRHAIAEGAKAVTNYMSSDAARD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0516 208 MobiDBLite consensus disorder prediction 18 110 - -
Prci6g0516 208 MobiDBLite consensus disorder prediction 35 51 - -
Prci6g0516 208 SUPERFAMILY Histone-fold 92 203 IPR009072 GO:0046982
Prci6g0516 208 PANTHER HISTONE H2B 82 202 IPR000558 GO:0000786|GO:0003677|GO:0030527
Prci6g0516 208 MobiDBLite consensus disorder prediction 63 99 - -
Prci6g0516 208 Pfam Core histone H2A/H2B/H3/H4 66 179 IPR007125 GO:0003677
Prci6g0516 208 MobiDBLite consensus disorder prediction 19 34 - -
Prci6g0516 208 FunFam Histone H2B 21 203 - -
Prci6g0516 208 SMART h2b3 106 202 IPR000558 GO:0000786|GO:0003677|GO:0030527
Prci6g0516 208 Gene3D Histone, subunit A 19 204 IPR009072 GO:0046982
Prci6g0516 208 PRINTS Histone H2B signature 187 200 IPR000558 GO:0000786|GO:0003677|GO:0030527
Prci6g0516 208 PRINTS Histone H2B signature 157 174 IPR000558 GO:0000786|GO:0003677|GO:0030527
Prci6g0516 208 PRINTS Histone H2B signature 116 134 IPR000558 GO:0000786|GO:0003677|GO:0030527
Prci6g0516 208 PRINTS Histone H2B signature 135 155 IPR000558 GO:0000786|GO:0003677|GO:0030527
Prci6g0516 208 PRINTS Histone H2B signature 174 187 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0516 Prci-Chr6 3348396 3349443 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0516 K11252 - gmx:100786873 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0516 6 3348396 3349443 Prci6g0516 6 3348396 3349443 ECH