Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0489 ATGCCATTATCACCACTTTCTTTCCCTTTCCTCTTCATGTCTCCCTTCTTCCCTTTTCTTCTGCTTTCTCTCATGATTTCTTCAAGTAGTGCTCAGGGTCCGCCTTCACCAGATTACCTCCCAAGTTCCCAAATTAGCCCTCTTAGCTTTGATCAAGGGTTCAAAAACCTCTGGGGTCCTCAGCATCAGAGACTAGACCAGGGTTCATTAACAATCTGGCTTGACTCTAACTCAGGGAGTGGATTCAAGTCACTGAAATCTTATCAATCTGGTTACTTTGGAGCTGCAATTAAGCTTCAACCAGGTTATACTGCAGGAGTCATTACATCTTTCTATTTATCAAACAACCAAGACCACCCAGGAAACCATGATGAAATTGATATTGAGTTCCTTGGTACTACTCCGGATAAGCCCTATGTCTTGCAGACAAACGTATATATCAGAGGCAGTGGAGATGGAAATATCATAGGCAGAGAAGTGAGGTTTCATCTCTGGTTCGACCCAACACAAGATTTTCACAACTATGCTATTCTGTGGAAACCCCGCGAGATCATATTCCTGGTTGACGATATCCCCATACGGAAGTATCCTCGGAAGAGCGATGCCACATACCCTACAAGACCAATGTATGTGTACGGATCAATATGGGATGCTTCGTCCTGGGCAACAGAGGATGGAAAATACAAAGCTGATTACAAGTATCAACCCTTTGTTGGTAGGTATAAGAACTTCAAAATCAAAGGTTGCACCAGTAATGACCCTGCCTCGTGCCAACCACCCTCTGCGTCACCTTCCGGCTATAGCAGTCTGACCCCTCAGCAATATGCCACCATGCAATGGGTCCAAAACAACTACTTGGTCTATAACTATTGCCATGACCCTAAGAGAGATCATACACTCACTCCTGAGTGCTAG 915 0.4459 MPLSPLSFPFLFMSPFFPFLLLSLMISSSSAQGPPSPDYLPSSQISPLSFDQGFKNLWGPQHQRLDQGSLTIWLDSNSGSGFKSLKSYQSGYFGAAIKLQPGYTAGVITSFYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDGNIIGREVRFHLWFDPTQDFHNYAILWKPREIIFLVDDIPIRKYPRKSDATYPTRPMYVYGSIWDASSWATEDGKYKADYKYQPFVGRYKNFKIKGCTSNDPASCQPPSASPSGYSSLTPQQYATMQWVQNNYLVYNYCHDPKRDHTLTPEC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0489 304 Pfam Glycosyl hydrolases family 16 51 233 IPR000757 GO:0004553|GO:0005975
Prci6g0489 304 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 304 IPR013320 -
Prci6g0489 304 FunFam Xyloglucan endotransglucosylase/hydrolase 38 304 - -
Prci6g0489 304 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 268 304 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Prci6g0489 304 PIRSF EndGlu_transf 19 304 IPR016455 GO:0010411|GO:0016762|GO:0042546
Prci6g0489 304 Gene3D - 30 304 - -
Prci6g0489 304 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 44 304 IPR044791 GO:0004553
Prci6g0489 304 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 29 241 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0489 Prci-Chr6 3198493 3200404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0489 21 304 Glycoside Hydrolase AT3G44990 66.549 3.38e-142 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0489 K08235 - gmx:100776165 533.102