Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0442 ATGGCCGGAAAAGCTGCTGCAACTTCGACGACCTACTCGCCGTCTTCGACCACCGAGAAAACCAAGGCTCCTATTTTCAATGAAGATTGGGTCCGACCCGATGGCCGTGGCTTTCACCAGTGCAGGCCCGCTTTTTTCAGAACTGGTGCTGTGAATGCTGCCTCTGGATCTGCTTATGCAGAGTTTGGGAGTACCAAGGTCATTGTATCCGTGTTTGGGCCAAGAGAGAGTAAGAAGGCCATGATGTACAGTGACATAGGGCGTCTAAATTGCAATGTAAGCTTTACAACATTTGCAACTCCAATTCGTGGCCAGGGATTGGACAATAAAGAGTACACTGCGATGCTTCATAAAGCTTTGGAGGGTTCAATAATGTTGGAAACTTTTCCCAAGACCACCGTGGATGTTTTTGCATTGGTACTGGAATCTGGTGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTAGCAGATGCTGGAGTAATGATGTATGACCTTGTTGCCTCAGTTTCTGTGAGTTGTCTCGGTAAGAACCTTGTTATTGATCCTATTTTGGAGGAGGAAAGCTGTCAAGATGGAAGCTTAATGATAACTTGCATGCCTTCTCGTTATGAGATCACCCAGCTCACTGTCACCGGGGATTGGTCCACCCCAAAGATTAACGAGGGAATGCAGCTATGCTTAGATGCTTGTGCAAAGCTTGCAAGGCTCATGAGGTCATGTTTGAAAGAAGCTGCTCAAGGTTCTCAAGAATAG 765 0.4706 MAGKAAATSTTYSPSSTTEKTKAPIFNEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGSTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGLDNKEYTAMLHKALEGSIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGVMMYDLVASVSVSCLGKNLVIDPILEEESCQDGSLMITCMPSRYEITQLTVTGDWSTPKINEGMQLCLDACAKLARLMRSCLKEAAQGSQE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0442 254 PANTHER EXOSOME COMPLEX COMPONENT 32 245 - -
Prci6g0442 254 FunFam Exosome complex component RRP41-like 11 250 - -
Prci6g0442 254 MobiDBLite consensus disorder prediction 1 20 - -
Prci6g0442 254 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Prci6g0442 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 22 193 IPR020568 -
Prci6g0442 254 Gene3D - 18 253 IPR027408 -
Prci6g0442 254 CDD RNase_PH_MTR3 41 247 - -
Prci6g0442 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Prci6g0442 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 249 IPR036345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0442 Prci-Chr6 2843953 2847827 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0442 K12587 - gmx:100819105 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0442 6 2843953 2847827 Prci6g0442 6 2843953 2847827 ECH