Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0406 ATGCTACGCCGGCAACTCGTCGTTTTTCTTTCCCTCGCTACTCTTCTCCTCCTGTCCTCCTTCTCTCTCACTTTATGCAAGAGCGTTGAAAACGACAACGACGATGAAGATCTCAGCTTTCTCGAAGAAGCTGATGATAGCTCTGCCTCCCACCATCATTACCCAGATCCGGATATTTTCGACGATGGTTCCGTCGGCGAAGACGATTTTGAGGACTTCTCCGGCTTCGACGAGTCGGACGTCGATTCGGAGGCATACAAAGAACCCGAGCTGGATGACAAAGATGTTGTTGTATTGAAGGAGAGTAATTTCAGTGATGTTGTGAACAAAAATCAGTTTGTGATGGTGGAATTTTACGCACCCTGGTGTGGTCACTGCCAGGCTCTGGCTCCAGAGTATGCTGCCGCCGCCACCGAGTTGAAGGGCGAGAATGTGATTTTGGCGAAGGTGGATGCCACGGAGGAGAATGAATTAGCCCAGGAGTACGAAATTCAGGGATTCCCCACAGTCTACTTCTTTGTCGATGGGGTTCACAAGCCTTACAATGGCCAGAGGACCAAAGATGCTATAGTGACCTGGATTAAGAAGAAGATAGGACCCGGTGTTTCCAATATAACTACATTGGAGGATGCCGAGCGCATATTGACCTCGGAAAACAAAGTTGTTTTGGGCTTCCTCAACTCTATAGCGGGTCCTGAGAGTGAGGAGCTGGCTTCTGCATCCCGACTTGAGGATGATGTCAATTTTTATCAAACCGTTAATCCTGAAGTGGCAAAGCTTTTCCATATTGACGCAAATGTCAAACGTCCTGCTTTGGTCCTGCTCAAGAAAGAGGAGGAGAAATTGAACCATTTTGATGGCCAATTCATAAAATCTGCAATAGCAGAATTTGTGTTCTCAAACAAACTTCCTTTGGTCACAACTTTTACAAGAGAAAGTGCCCAATCAGTTTTTGACAACCCAATCAAGAAACAGCTGTTGCTCTTTGTTACTTCAAATGATTCAGGGAAGCTACTCCCAGTATTCCAAGAAGCAGCAAAATTTTTCAAGGGAAAGCTGATCTTTGTACATGTGGAACTGGATAATGAAGATGTTGGAAAGCCAGTTTCAGAATTCTTTGGCATCAGTGGGAATGCTCCAAAAGTACTTGCATACACTGGAAATGATGATGGAAAGAAATTTGTGCTTGATGGAGAAGTGACTGTTGACAAAATTAAGGCATTTGGGGATGATTTCCTTGAAGACAAGCTAAGACCTTTCTACAAGTCAGATCCAGTTCCTGAAAATAACGATGGGGATGTGAAAATAGTGGTTGGGGATAACTTTGACGAGATTGTGTTGGATGAGTCTAAGGATGTTCTTCTTGAGATTTATGCGCCATGGTGTGGTCATTGCCAAGCTCTTGAGCCAACATACAATAAGCTAGCAAAACATCTGCGTGGCATTGAGTCTCTTGTCATAGCCAAGATGGACGGAACAACAAATGAGCATCCCAGGGCAAAGACTGATGGATTCCCCACCATTCTCTTCTTCCCAGCCGGAAACAAGAGTTTTGACCCTATTACCGTGGATACAGATCGTACAGTGGTAGCCTTTTACAAGTTCCTAAAGAAGCATGCTTCAATCCCATTCAAGCTCCAGAAACCGACGACAACTGCCAAATCAACTAGTTCTGATGTTAAGGAGAGTCACAGTAGCAGTAACGATGTGAAGGATGAATTATGA 1725 0.4464 MLRRQLVVFLSLATLLLLSSFSLTLCKSVENDNDDEDLSFLEEADDSSASHHHYPDPDIFDDGSVGEDDFEDFSGFDESDVDSEAYKEPELDDKDVVVLKESNFSDVVNKNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQEYEIQGFPTVYFFVDGVHKPYNGQRTKDAIVTWIKKKIGPGVSNITTLEDAERILTSENKVVLGFLNSIAGPESEELASASRLEDDVNFYQTVNPEVAKLFHIDANVKRPALVLLKKEEEKLNHFDGQFIKSAIAEFVFSNKLPLVTTFTRESAQSVFDNPIKKQLLLFVTSNDSGKLLPVFQEAAKFFKGKLIFVHVELDNEDVGKPVSEFFGISGNAPKVLAYTGNDDGKKFVLDGEVTVDKIKAFGDDFLEDKLRPFYKSDPVPENNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKTDGFPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTTTAKSTSSDVKESHSSSNDVKDEL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0406 574 NCBIfam protein disulfide-isomerase domain 99 197 IPR005788 GO:0003756
Prci6g0406 574 SUPERFAMILY Thioredoxin-like 204 313 IPR036249 -
Prci6g0406 574 Pfam Thioredoxin-like domain 238 409 - -
Prci6g0406 574 MobiDBLite consensus disorder prediction 549 574 - -
Prci6g0406 574 CDD PDI_b'_family 323 413 - -
Prci6g0406 574 Gene3D Glutaredoxin 303 427 - -
Prci6g0406 574 Pfam Thioredoxin 434 519 IPR013766 -
Prci6g0406 574 Pfam Thioredoxin 96 196 IPR013766 -
Prci6g0406 574 Gene3D Glutaredoxin 428 542 - -
Prci6g0406 574 SUPERFAMILY Thioredoxin-like 89 199 IPR036249 -
Prci6g0406 574 Gene3D Glutaredoxin 84 198 - -
Prci6g0406 574 CDD PDI_b_family 202 301 - -
Prci6g0406 574 NCBIfam protein disulfide-isomerase 94 574 IPR005792 GO:0003756
Prci6g0406 574 ProSitePatterns Thioredoxin family active site. 454 472 IPR017937 -
Prci6g0406 574 ProSiteProfiles Thioredoxin domain profile. 64 199 IPR013766 -
Prci6g0406 574 ProSiteProfiles Thioredoxin domain profile. 420 541 IPR013766 -
Prci6g0406 574 FunFam Protein disulfide-isomerase 303 428 - -
Prci6g0406 574 SUPERFAMILY Thioredoxin-like 301 431 IPR036249 -
Prci6g0406 574 PRINTS Thioredoxin family signature 122 131 - -
Prci6g0406 574 PRINTS Thioredoxin family signature 163 174 - -
Prci6g0406 574 PRINTS Thioredoxin family signature 114 122 - -
Prci6g0406 574 PANTHER PROTEIN DISULFIDE ISOMERASE 12 573 - -
Prci6g0406 574 ProSitePatterns Thioredoxin family active site. 115 133 IPR017937 -
Prci6g0406 574 FunFam Protein disulfide-isomerase 429 542 - -
Prci6g0406 574 CDD PDI_a_family 97 194 - -
Prci6g0406 574 CDD PDI_a_PDI_a'_C 434 536 - -
Prci6g0406 574 FunFam Protein disulfide-isomerase 85 197 - -
Prci6g0406 574 SUPERFAMILY Thioredoxin-like 428 541 IPR036249 -
Prci6g0406 574 FunFam protein disulfide-isomerase A2 198 302 - -
Prci6g0406 574 MobiDBLite consensus disorder prediction 549 563 - -
Prci6g0406 574 Gene3D Glutaredoxin 199 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0406 Prci-Chr6 2609654 2613556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0406 K09580 - qsa:O6P43_000320 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2535 7 37774664 37778974 Prci6g0406 6 2609654 2613556 CCT