Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0396 ATGAGAGCGACACGGATTCTATTTCTTTTCTTTTGGTTCATAGGCATTCTAGCCTACACGTCGTTTTGCGCCAATGTCACGTACGACCACCGTGCATTGCTCATCGGCGGCAAGCGCCGTATCCTCATCTCTGGTTCCATTCATTACCCTCGCAGCACTCCCGAGATGTGGCCGGACCTTATTCAGAAATCCAAAGACGGAGGACTGAATGTGATTGAAACATATGTGTTCTGGAACAAGCACGAACCAGTGCGAGGCCAGTATAACTTTGAAGGCGGGAACGATCTAGTGAAATTTGTGAAGTTAGCAGCAGCAGCAGGTCTATACGTGCATCTACGAATTGGTCCGTACGTATGCGCTGAATGGAACTACGGCGGTTTCCCTCTCTGGTTGCATTTTATTCCTGGAATTCAGTTCCGTACTGATAATGAACCATTCAAGAGAGAAATGCAACGATTTACTGCTAAAATTGTGGACTTGATGAAGCAAGAGAAACTCTATGCGTCTCAGGGAGGACCTATTATATTATCTCAGATTGAAAATGAGTATGGTAACGGAGACATTGAGCCTCGCTATGGTCCTGCTGCAAAACCTTACGTCAAGTGGGCAGCTGCAATGGCCACGTCACTCAATACGGGAGTTCCCTGGGTCATGTGCCAGCAAGCAGATGCTCCGGACCCCATTATTAACACTTGCAATGGATTTTACTGTGATCAATTCACACCAAACTCTAACCAGAAACCAAAATTTTGGACTGAGAATTGGAGTGGATGGTTTCGATCATTTGGTGGTGCAGTTCCCTACAGACCTGTAGAAGATCTTGCATTTGCTGTGGCACGGTTTTTCCAACGAGGGGGCACATTACAAAATTATTATATGTACCATGGTGGGACTAACTTTGACCGAACTTCTGGCGGACCATTCATCTCAACAAGTTATGATTACGATGCACCAATTGATGAGTATGGAATTGTGAGACAGCCGAAGTGGGGACACCTCAAAGATGTGCATAAGGCCATAATGCTTTGTGAAGAAGCGTTGATAGCCACTGATCCCCAAATTAAATCGCTTGGTCCAAATCTAGAGGCTGCAGTTTACCGGGCAGGATCTACGTGTGCTGCGTTTCTTGCCAATGTGGGCACCTCATCTGATGCAACAGTAAATTTCAATGGCAATTCCTATCACTTGCCTGCCTGGTCTGTGAGCATTTTACCAGACTGCAAGAATGTAGCGCTCAATACTGCAAAGGTTAATTCTCTCTCTACCATTTCAAGCTTCACGAGAGAAATTTTCAAAGAAGACAGTGATTCTTTAGAAGGTTCTAGTTCCGGGTGGAGTTGGACAAGTGAAACAGTAGGTATTTCAAAAGATGATGAATTCTCAAAAGTTGGATTACTGGAGCAAATAAATACAACAGCAGATAGAAGTGACTATTTGTGGTACTCATTGAGCATTGATCTTGATGATGATGGTGGGCCTCAAACTGTCCTTCACATCGAATCACTTGGTCATGCCCTCCATGCATTTATCAATGGGAAGCTTGCAGGGAGTGGAGTCCGTGATGCTGCCAAAAAGTTGGATGTTCCTGTAACTCTTGTGGCTGGGAAGAACACTATTGATCTCCTGAGTCTAACTGTGGGACTTCAGAACTATGGAGCCTTTTTTGACACATGGGGTGCTGGAATAACTGGCCCTGTTAGATTGAACGGTTTGAAAAATGGGAGCACTCTTGATCTCTCCTCCCAGCAGTGGACATATCAGGTTGGTCTTCAAGGTGAACAATTAGGTCTTTCTGATGGTAGTTCTGGAAACTGGAACTCACAGTCTACCTTACCTAAGAATCAACCATTGACTTGGTACAAGACAAACTTCGCTGCTCCTTCTGGCAATAAACCAGTAGCAATTGACTTCACGGGTATGGGTAAAGGTGAGGCTTGGGTAAATGGACAAAGCATAGGTCGATTCTGGCCCGCATATATTGCTCCAAAGAGTGGCTGCAATGAGGCCTGCAACTACAGAGGAGCTTATAATTCCAACAAATGTCTCAAAAATTGTGGAAAGCCATCACAATCATTATACCATGTACCTCGCTCGTGGTTGCGTCCAAGTGGTAACATTTTTGTGTTGTTTGAGGAAATTGGAGGCGATCCAACTCTAATAACTTTTGCCACAAAGCAGATAGAAAGCCTGTGCGCGCATGTTTCAGAATCTCACCCACCACCTGTAGGCTCGTGGAATACAGACGCGGAATCAGGAAGAAAACTAGGGCCCGTACTTTCACTCGAGTGCCCTAATCCTGATCAGGTTATCTCTTCCATTAAATTTGCTAGCTTTGGAACCCCTCATGGGACTTGTGGGAACTTCATCCATGGCCGCTGCAGCAGCAAAAGAGCACTTTCCATTTTACACAAGGCCTGCGTTGGATCAAGAAGCTGTAGTGTTGGAGTGTCAGTCGATATATTCGGCAATCCGTGCAGAGGAGTGGCAAAGAGTTTGGCCGTTGAGGCTGCTTGTACATAA 2520 0.4536 MRATRILFLFFWFIGILAYTSFCANVTYDHRALLIGGKRRILISGSIHYPRSTPEMWPDLIQKSKDGGLNVIETYVFWNKHEPVRGQYNFEGGNDLVKFVKLAAAAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIQFRTDNEPFKREMQRFTAKIVDLMKQEKLYASQGGPIILSQIENEYGNGDIEPRYGPAAKPYVKWAAAMATSLNTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNQKPKFWTENWSGWFRSFGGAVPYRPVEDLAFAVARFFQRGGTLQNYYMYHGGTNFDRTSGGPFISTSYDYDAPIDEYGIVRQPKWGHLKDVHKAIMLCEEALIATDPQIKSLGPNLEAAVYRAGSTCAAFLANVGTSSDATVNFNGNSYHLPAWSVSILPDCKNVALNTAKVNSLSTISSFTREIFKEDSDSLEGSSSGWSWTSETVGISKDDEFSKVGLLEQINTTADRSDYLWYSLSIDLDDDGGPQTVLHIESLGHALHAFINGKLAGSGVRDAAKKLDVPVTLVAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVRLNGLKNGSTLDLSSQQWTYQVGLQGEQLGLSDGSSGNWNSQSTLPKNQPLTWYKTNFAAPSGNKPVAIDFTGMGKGEAWVNGQSIGRFWPAYIAPKSGCNEACNYRGAYNSNKCLKNCGKPSQSLYHVPRSWLRPSGNIFVLFEEIGGDPTLITFATKQIESLCAHVSESHPPPVGSWNTDAESGRKLGPVLSLECPNPDQVISSIKFASFGTPHGTCGNFIHGRCSSKRALSILHKACVGSRSCSVGVSVDIFGNPCRGVAKSLAVEAACT 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 615 629 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 642 658 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Prci6g0396 839 Pfam Galactose binding lectin domain 761 838 IPR000922 GO:0030246
Prci6g0396 839 Gene3D - 456 582 - -
Prci6g0396 839 FunFam Beta-galactosidase 22 343 - -
Prci6g0396 839 SUPERFAMILY Galactose-binding domain-like 401 570 IPR008979 -
Prci6g0396 839 Gene3D Glycosidases 20 342 - -
Prci6g0396 839 Pfam Glycosyl hydrolases family 35 33 339 IPR031330 -
Prci6g0396 839 FunFam Beta-galactosidase 419 570 - -
Prci6g0396 839 Gene3D - 583 731 - -
Prci6g0396 839 SUPERFAMILY Galactose-binding domain-like 583 747 IPR008979 -
Prci6g0396 839 Gene3D - 754 839 IPR043159 -
Prci6g0396 839 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
Prci6g0396 839 CDD Gal_Rha_Lectin_BGal 756 838 - -
Prci6g0396 839 FunFam Beta-galactosidase 591 731 - -
Prci6g0396 839 ProSiteProfiles SUEL-type lectin domain profile. 753 839 IPR000922 GO:0030246
Prci6g0396 839 FunFam Beta-galactosidase 292 418 - -
Prci6g0396 839 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Prci6g0396 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Prci6g0396 839 PANTHER BETA-GALACTOSIDASE RELATED 20 759 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0396 Prci-Chr6 2527533 2534809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0396 23 692 Glycoside Hydrolase AT2G28470 74.556 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0396 - - gmx:100804036 1414.44