Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0388 ATGTCGACCACCGTCTCTATTTTCTCCGCCCCGCTGCTGCTGCTGCTCGCCATCTTCTATTCCTCCACCACCACCTCAGCCCAGTTATCTCCGGTTAAAGCTCCCGCAGCAGCTCCTCCGGTAGTCTCGACATCACCACCACCCGCGACCTTGCCGGCGCCTCCCACTTCTCTCCCGGCCACGTCTCCGGCCGCTGCTGCTCCTGCCCCGGGACTTAGCACTGTTCCCCTGGTACCGAACACGCCCAGCGCCGCCCCTGGGCCCGCAGTGGCGGTGGTCCCTAAAACTCTCTCCATTGATATTGTGCAAATACTCAGGAAGGCCAAGAGATTCACCGTCCTTATCCGCCTCCTCAAGACCACCCAGTTGATCAACCAGCTCAATTCTCAACTAGCCACCTCCGGCTCCGGCGGATTGACCATTTTCGCCCCTGAGGACGCCGCCTTCTCGAAACTTAAAGCAGGATTTCTTAACTCTCTCAATGACAGGCAAAAGGTGGAGCTTTTACAGTTCCATACCATTTCCACCTACATCTCTATCTCCAACTTCGACACCCTCACCAACCCCGTTCAGACTCAGGCCGGCGACGACCCCAAGAGGCTTCAACTTAACGTCACCATGTACGGGGGCAACCAGGTCAGCATGACCACCGGCGCCGTCAATGCCTCCTTGACGGGAACCGTGTATACGGACAACAAACTTGCCATATATCAGGTGGACAAGGTGCTTCTTCCACTTGACATCGTGCTTCCTAAGGCTAGTGCCCCGGCACCGGGCCCAGCTGCCGCAAAGGGAGACTCGCCTAAAACTGATAAAACTAAGGCAGCCGGAGGGGATCAGAGCGGTGGTGATGATGACGGTGACAGTAACGGTAAAGCCGTTCCGGCGAACAGTTCCATGGGTCTGAAGGTAGAGGTAATGTGGGTACGTCTTGCGGTTGGAGTTGCATTTGTGGCGGGAGCCATGATCATGTGA 975 0.5682 MSTTVSIFSAPLLLLLAIFYSSTTTSAQLSPVKAPAAAPPVVSTSPPPATLPAPPTSLPATSPAAAAPAPGLSTVPLVPNTPSAAPGPAVAVVPKTLSIDIVQILRKAKRFTVLIRLLKTTQLINQLNSQLATSGSGGLTIFAPEDAAFSKLKAGFLNSLNDRQKVELLQFHTISTYISISNFDTLTNPVQTQAGDDPKRLQLNVTMYGGNQVSMTTGAVNASLTGTVYTDNKLAIYQVDKVLLPLDIVLPKASAPAPGPAAAKGDSPKTDKTKAAGGDQSGGDDDGDSNGKAVPANSSMGLKVEVMWVRLAVGVAFVAGAMIM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0388 324 MobiDBLite consensus disorder prediction 255 294 - -
Prci6g0388 324 FunFam Fasciclin-like arabinogalactan protein 11 82 245 - -
Prci6g0388 324 ProSiteProfiles FAS1/BIgH3 domain profile. 98 243 IPR000782 -
Prci6g0388 324 SMART fasc_3 140 246 IPR000782 -
Prci6g0388 324 MobiDBLite consensus disorder prediction 35 65 - -
Prci6g0388 324 Gene3D FAS1 domain 98 245 IPR036378 -
Prci6g0388 324 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 294 IPR045003 -
Prci6g0388 324 SUPERFAMILY FAS1 domain 89 246 IPR036378 -
Prci6g0388 324 MobiDBLite consensus disorder prediction 40 61 - -
Prci6g0388 324 Pfam Fasciclin domain 110 245 IPR000782 -
Prci6g0388 324 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0388 Prci-Chr6 2489174 2490470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0388 - - gmx:100801554 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0388 6 2489174 2490470 Prci6g0388 6 2489174 2490470 ECH