Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0364 ATGGCGGCCTCTATGGCGGCATCACGATTATCCCATTTCTCCTATCATGCTAGACAGCAATCTTCGCCGTCCGATATCCCTCCGTTAACCACCTTCAAACCGTCCAATTCTCATCCAAAACGCTTCCGGAGCCTTTCCACCCGGGCTTTACTTCAGGGGGAAAACGAACTGAACAAGAACCCCAAAGCTCTTGATTTGCGAAGCGCCGATGACTTCCCAGGTGACGTCGTCTCCAAAGACATGCTCGCCCTGCCGCGGCCATTGTCTTCCGCTCAGTTTTCTGGTTCAGTTTCTGATAGATCTCGCCTTCGTGTGGGATACCAGGGAGTTCGTGGCGCTTACAGCGAGTCAGCCGCACAGAAAGCCTACCCAAATTGTGAAGCAGTGCCTTGTGATGAATTTGACACCGCTTTTGAAGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTACCAATTGAGAATTCTTTAGGAGGGAGCATTCACAGAAATTATGACCTATTACTCCGTCACAGGTTGCATATAGTGGGAGAAGTAAAATATGCAGTCCGCCATTGTCTGTTGACCAATCATGGTGTTAAAATTGAGGATTTGAAGCGGGTACTTAGCCATCCACAGGCTCTTGCTCAGTGTGAGGATACATTGACTAGTTTGGGATTGGTCAGAGAAGCAGTAGATGACACAGCTGGTGCTGCAAAGCATGTTGCTTTCCACAAACTACGAGATGCAGGAGCAGTTGCTAGTTCTGCCGCTGCTGAGATCTATGACTTGAATATACTTGCTCAAGATATTCAGGATGATAGTGATAATATCACACGTTTTTTAATGTTAGCACGAGAACCTATTATTCCAGGCACAGATAGGCAATTTAAGACAAGCATAGTTTTTTCTTTAGAGGAGGGTCCTGGGGTACTTTTCAAGGCACTTGCTGTTTTTGCGCTGCGACAAATCAACCTCACAAAGATAGAAAGTCGGCCATTGAGGAACCAACCTTTACGAGCATCATCTGACGATAACTATAGTGGGCCCAAGTACTTCGATTATCTTTTCTATGTGGATTTCGAAGCATCAATGGCTGATCAGAATGCACAAAATGCCCTTAGGCATCTAAAGGAGTTCGCTACATTCCTGCGAGTGCTTGGGAGTTATCCTGTGGACACAAGTACGGCATAA 1173 0.4646 MAASMAASRLSHFSYHARQQSSPSDIPPLTTFKPSNSHPKRFRSLSTRALLQGENELNKNPKALDLRSADDFPGDVVSKDMLALPRPLSSAQFSGSVSDRSRLRVGYQGVRGAYSESAAQKAYPNCEAVPCDEFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVRHCLLTNHGVKIEDLKRVLSHPQALAQCEDTLTSLGLVREAVDDTAGAAKHVAFHKLRDAGAVASSAAAEIYDLNILAQDIQDDSDNITRFLMLAREPIIPGTDRQFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRASSDDNYSGPKYFDYLFYVDFEASMADQNAQNALRHLKEFATFLRVLGSYPVDTSTA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0364 390 Gene3D - 98 187 - -
Prci6g0364 390 CDD ACT_CM-PDT 291 384 - -
Prci6g0364 390 FunFam Arogenate dehydratase 99 186 - -
Prci6g0364 390 FunFam Arogenate dehydratase 187 267 - -
Prci6g0364 390 Pfam Prephenate dehydratase 105 281 IPR001086 GO:0004664|GO:0009094
Prci6g0364 390 FunFam Arogenate dehydratase 286 387 - -
Prci6g0364 390 ProSitePatterns Prephenate dehydratase signature 2. 319 326 IPR018528 GO:0004664|GO:0009094
Prci6g0364 390 ProSiteProfiles ACT domain profile. 293 384 IPR002912 -
Prci6g0364 390 MobiDBLite consensus disorder prediction 14 40 - -
Prci6g0364 390 SUPERFAMILY ACT-like 274 385 IPR045865 -
Prci6g0364 390 Gene3D - 286 387 - -
Prci6g0364 390 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 46 389 - -
Prci6g0364 390 Gene3D - 188 267 - -
Prci6g0364 390 CDD PBP2_Ct-PDT_like 104 281 - -
Prci6g0364 390 ProSiteProfiles Prephenate dehydratase domain profile. 104 279 IPR001086 GO:0004664|GO:0009094
Prci6g0364 390 ProSitePatterns Prephenate dehydratase signature 1. 255 277 IPR018528 GO:0004664|GO:0009094
Prci6g0364 390 SUPERFAMILY Periplasmic binding protein-like II 104 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0364 Prci-Chr6 2274347 2278388 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0364 K05359 - gmx:100787387 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0364 6 2274347 2278388 Prci6g0364 6 2274347 2278388 ECH