Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0336 ATGGATGATGAATTGCTTGAGTTGCAGAGACTATTCGAGTTCGCACAGCAGGAAAAGTCGAATATTCGATTATCGGAACGAAATGTTGTTGAATTGGTTCAGAAATTGCAGGAGCTTCGTATCATAGATTTCGACCTCCTTCACACTGTCTCTGGCAAAGAGTACATCACTCCCGAACAACTGAGGAATGAGATGGTGGCTGAAATTAAGAAGCTAGGGCGTGTTTCTCTGATTGATCTCGCTGACGCTACCGGAGTCGATTTATACCATGTTGAGAAGCAGGCTCAACAAGTTATAAAAGATCATCCAGAGATGATGTTGGTTCAAGGGGAAATTATGTCAGAATTTTATTGGGATTCGATAGCTGAAGAAATTAATGAGAGGCTTCAGGAATGCAGTCAGATTGCACTTACAGAACTTGCTGCACAATTAAATGTTGGTCTAGAATTGATTGCCTGCATGTTGGAGCCTCGTCTTGGAATGATGGTGAAGGGCAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCATATGTAGCTCGTGTTGGTGCCATGGTTCGAGGTGCTGCCAGGGGCATCACTGTTCCAACAAATTTGTCATTTTTATGGAGCTTGTTACAGCAATTACTGCAAGAAATGGATGGAACCAGCAGTGTGGTTGTTGAAGGAGCTTTCTTCCAGGCACTTTTTAATGGGCTTGTGAAGGAAAGTGAGATTCTAGGATCACTTCGTGCTGGAATACATTGGACACCTGCGGTCTTTGCCATTGCTCAAAAGGAATCTGTGGATACATTCTTTTCACAGAATTCTTTTATTAGCTATGACGTTCTACAGAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATATCCTGAAGGTATACCTCTAGTTACGGTGTTTGTCCGCCCATCAATGATTGAAATGCTGGATGCTGCTACTGAGGATGCTCTTGACCGTGGTAGTTGGAGTGATGCTCTTTCCTTATTGCCTTCATCCTTCACCCCTCAAGATGCATCTAAAATGTTGACCTTCTGCCAATCAGTTCAATCTGCTCTTAAGTCTAACAAAGCACGCGTTTTTGGGGATTTTTATGTTTTGAGCAACAGCTTTATGAAGGGCATCTGTGAGCACTTGGTGAAAGAATTGGAAACATTAGGTGTTACAGGGTCCTCTGGCATCAAAATGTTTAGTGATTCGCAAGTAACGAATGAAGTAAAAGTTGGGCAAGACTTGATTCGATCAAATGAAACTGCAACAGATGGTGGTGTCATTAAACATGTTGATAGAGGATCAAAGAAGAAAAAGGGAAAGGCTACTGGGAACGATGTGTCTGACAGTGCTGCAGATGTTCCAGAACAGACTTCCACAAAATCCAAAAGAAGCCAGAGAAGGGGCAAGGATACATCCTCCTCACAAATGTCAGATTCAAAAATAGGTTCGAGGAAAACGAAGGATGATAACCTCAGCAGTCCTTCAGATGGGTGGATTATGCAGAAGATTATGACTTTCGTTCCTGATTTTGAAGAACAATCTATGGATGAGCCTGAAACAATTCTGAGGCCTTTGGCTAATCATTTAAGGCCTACAATAATGGCTTCCTGGATGGAGAAGAAGAAAGCATTGTTTACAGAAAATACAGAAAGAATGAAATCTTTGCTTGATAATTTGCAAAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTTTATGAAAAAGCTGTAGAGTTGTTTGAAGATGACCAATCAACCTCTGTTGTTTTGCACAGGCATTTATTGAGAACTGTAGCTGCCCCTATGGTCGATTTGCTTCTTCGTAAGTTGGATGAGCACAACAAGTTAAAGAATGGGCTTAAAGTGGAGGAAGCTTCAAATTCAGAACTACTTATCCTTAGTCCTGGAGACAGAACTGCAATTTGGAAGAGTTTACCGGGAGCACTTTGTAAAAAAGCTCTTGGTGTTGTTGAAACATTGGAAGGAAAGCGGGTGGAAACGTTTATGGATGCTTTTAGAGAGGTAGCAGAAGAGAGTGGATTGTCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTTACACTCTTATCGTAAGGAACTGACATCTCAAATTTCTATTGAGACTGATCCAATATCACTTCTGGCAAAAGTTGTGTCTTTACTTTACGTGCAGGTTTACCACAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTCGCCATCTCCCAACTGAAGGACAAGTTAGATGAGTCGTCATTCAAGATTTTAACTGATTATCAGAGCGCTACGGTGACTCTTCTGGCATTATTAGCAGCTGCAACTGGCGATGAAGAGGATTGTACATCTGATAGAATATTGAGCAAAAGGGAGCTTCTCGAGAGCCAAATGCCTACTCTGAAAAGCTTGGTTTTGAGAACCTCGCAATCTTCTTAG 2436 0.4179 MDDELLELQRLFEFAQQEKSNIRLSERNVVELVQKLQELRIIDFDLLHTVSGKEYITPEQLRNEMVAEIKKLGRVSLIDLADATGVDLYHVEKQAQQVIKDHPEMMLVQGEIMSEFYWDSIAEEINERLQECSQIALTELAAQLNVGLELIACMLEPRLGMMVKGRLEGGQLYTPAYVARVGAMVRGAARGITVPTNLSFLWSLLQQLLQEMDGTSSVVVEGAFFQALFNGLVKESEILGSLRAGIHWTPAVFAIAQKESVDTFFSQNSFISYDVLQKLGIPQPIQFLQSRYPEGIPLVTVFVRPSMIEMLDAATEDALDRGSWSDALSLLPSSFTPQDASKMLTFCQSVQSALKSNKARVFGDFYVLSNSFMKGICEHLVKELETLGVTGSSGIKMFSDSQVTNEVKVGQDLIRSNETATDGGVIKHVDRGSKKKKGKATGNDVSDSAADVPEQTSTKSKRSQRRGKDTSSSQMSDSKIGSRKTKDDNLSSPSDGWIMQKIMTFVPDFEEQSMDEPETILRPLANHLRPTIMASWMEKKKALFTENTERMKSLLDNLQKKLDESFLNMQLYEKAVELFEDDQSTSVVLHRHLLRTVAAPMVDLLLRKLDEHNKLKNGLKVEEASNSELLILSPGDRTAIWKSLPGALCKKALGVVETLEGKRVETFMDAFREVAEESGLSLKKLDKKLERTLLHSYRKELTSQISIETDPISLLAKVVSLLYVQVYHKALQAPGRAISVAISQLKDKLDESSFKILTDYQSATVTLLALLAAATGDEEDCTSDRILSKRELLESQMPTLKSLVLRTSQSS 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0336 811 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Prci6g0336 811 MobiDBLite consensus disorder prediction 424 495 - -
Prci6g0336 811 Coils Coil 555 575 - -
Prci6g0336 811 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 810 IPR018611 GO:0061666|GO:0071569
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0336 1 777 EF-hand Containing Proteins AT3G46220 62.100 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0336 K22755 - gmx:100808087 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0336 6 1957005 1963171 Prci6g0336 6 1957005 1963171 ECH