Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0333 ATGGACCCCATCACTGTTCTCTACATTGTTCTGGCATCCTACTTCTGCTTCTCGATCTGGAAGTTCTTCGACCGCAAAAAAGACCAAGAATGCTACATCCTCGACTATCAATGCTACAAACCCACCGACGATCGAAAGCTCTCCACCGAGTTCTGCGGGAGGATCAAAGCGAACCGAAACCTTGGCCTCGGCGAGTACAAGTTCCTCCTCAAAGCCATCGTCAGCTCTGGCATCGGCGAGCAAACCTACGCCCCGAGAAACGTCTTCTCCGGCCGAGAAGCCTCCCCCACCCTCGACGATGGCATCTCCGAGATGGAGGAGTTCTTCCACGACAGCATCGCCAAACTTCTCGCCAGGTCAGCCATTTCCCCCTCAGACATTGACATCCTCGTCGTTAACATCTCCATGTTCGCTTCCCTCCCCTCCTTGTCCTCTCGAATCATCAATCATTACAAGATGAGGGAGGATATCAAGGTCTACAACCTCACCGGCATGGGTTGCAGCGCTAGCCTCATTTCGCTCGACATTATTAAGAACATTTTCAAGACTCAGAAGAACAGGTACGCGCTCTTGGTCACTTCGGAGTCCCTGAGTCCGAATTGGTACTCCGGGAACGACAAATCCATGGTTCTAGCCAATTGCTTGTTTCGGTCCGGAGGGTGTGCCATTTTATTGACCAACAAAAGGTCCTTAAAGCACAAGGTGATGTTGAAGTTAAAGTGTCTGGTGAGGACCCATCACGGGTCTAGAGAAGAAGCGTACAACTGTTGCATTCAGAAAGAAGATGAGCAAGGAAGGCTAGGGTTTCACCTGGGGAAGACTCTCCCAAAGGCAGCCACGAGGGCATTCGTAGACAACTTGAGGGTAATCTCACCCAAGATTTTACCCATGAGGGAGCTGCTGAGGTTTATGGTGGTGTCCTTGATAAAAAAGCTGAGCGTTATGGGTAGTCCGCCCAAGTCTTCAAGCGGCGGAGTCACGAAATCGCCATTGAATTTCAAAACTGGGGTGGATCATTTTTGCTTGCACACGGGAGGAAAGGCGGTGATAGACGGGATCGGAATGAGCTTGGATCTGAGCGAGTACGATCTGGAGCCAGCAAGGATGACCCTACACCGTTTCGGCAACACGTCTGCAAGTAGTCTGTGGTATGTGTTGGGGTACATGGAGGCCAAGAAGAGGCTGAAGAAAGGGGATACAGTGTTCATGATAAGCTTTGGTGCAGGCTTTAAATGTAACAGCTGTTTGTGGGAGGTAATGCGAGATGTGGGAGGTAAGAATGTGTGGGACGATTGTATTGATGACTATCCACCAGATTCTCTGGCCAATCCTTTCATGGAGAAGTATGGTTGGATCAATGACCTCACGGCGGAGGATCTTCCCAACGTGCAAATCCCAGATTTTCTCAAGTAA 1413 0.5018 MDPITVLYIVLASYFCFSIWKFFDRKKDQECYILDYQCYKPTDDRKLSTEFCGRIIXANRNLGLGEYKFLLKAIVSSGIGEQTYAPRNVFSGREASPTLDDGISEMEEFFHDSIAKLLARSAISPSDIDILVVNISMFASLPSLSSRIINHYKMREDIKVYNLTGMGCSASLISLDIIKNIFKTQKNRYALLVTSESLSPNWYSGNDKSMVLANCLFRSGGCAILLTNKRSLKHKVMLKLKCLVRTHHGSREEAYNCCIQKEDEQGRLGFHLGKTLPKAATRAFVDNLRVISPKILPMRELLRFMVVSLIKKLSVMGSPPKSSSGGVTKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVMRDVGGKNVWDDCIDDYPPDSLANPFMEKYGWINDLTAEDLPNVQIPDFLK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0333 471 SUPERFAMILY Thiolase-like 243 421 IPR016039 GO:0016746
Prci6g0333 471 PANTHER 3-KETOACYL-COA SYNTHASE 15 439 IPR012392 GO:0006633|GO:0016020|GO:0016747
Prci6g0333 471 Gene3D - 73 420 IPR016039 GO:0016746
Prci6g0333 471 CDD CHS_like 18 418 - -
Prci6g0333 471 SUPERFAMILY Thiolase-like 20 231 IPR016039 GO:0016746
Prci6g0333 471 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 452 IPR012392 GO:0006633|GO:0016020|GO:0016747
Prci6g0333 471 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Prci6g0333 471 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 338 419 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0333 Prci-Chr6 1939653 1941407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0333 19 468 Acyl Lipid Metabolism Gene Families AT2G28630 72.926 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0333 K15397 - gmx:100809149 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2602 7 38169871 38171610 Prci6g0333 6 1939653 1941407 CCT