Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0287 ATGGCAGCGAACTCTTCAAATGGAGAACAACAAAAAGCAACGAAATCACCTCCCCTCCCATCCCCTTTGCGTTTTTCAAAATTCTTTCAGTCCAATATGAGAATCCTGGTCACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTTGATAGATTGATGGAAAATGACAAAAATGAGGTAATTGTTGTTGATAACTTTTTCACTGGATCAAAGGACAACCTTAGAAAATGGATTGGTCATCCAAGATTTGAGCTAATTCGTCATGACGTGACAGAGCAATTATTGGTTGAGGTTGATCAGATCTACCATCTTGCCTGCCCTGCTTCTCCAATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTTATTGGAACATTGAACATGCTTGGCCTTGCAAAGCGAGTGGGAGCACGTATTTTGCTTACCTCTACTTCAGAAGTATACGGGGATCCTCTTGTGCACCCACAGCCGGAAAGCTATTGGGGTAATGTTAACCCTATTGGAGTTCGGAGTTGCTATGATGAGGGGAAGCGTGTTGCAGAAACTTTGATGTTTGATTACCATAGGCAGCATGGAATAGAAATACGCATTGCTAGAATCTTTAACACTTATGGACCACGCATGAATATTGACGATGGGCGTGTTGTCAGCAATTTTATTGCCCAAGCACTTCGTGGAGAACCATTGACGGTCCAACATCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATATGGTTGATGGTCTCATCCGTCTCATGGAAGGGGAAAACACCGGTCCAATTAACCTTGGAAACCCAGGTGAATTTACAATGATTGAGCTTGCTGAGACGGTGAAAGAGCTTATTAATCCAGCAGTGGAAATAAAGATGGTGGAAAACACTCCTGATGACCCTCGACAGAGAAAACCAGACATAACAAAAGCAAAAGAATTGTTGGGTTGGGAGCCAAAGGTCAAGTTGCGAGATGGCCTTCCCCTTATGGAAGAAGATTTCCGTCTCAGGATTGGGGTTGAAAAGAACTGA 1038 0.4287 MAANSSNGEQQKATKSPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENDKNEVIVVDNFFTGSKDNLRKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQHPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMIELAETVKELINPAVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRIGVEKN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0287 345 MobiDBLite consensus disorder prediction 1 21 - -
Prci6g0287 345 CDD UGD_SDR_e 33 337 - -
Prci6g0287 345 MobiDBLite consensus disorder prediction 1 17 - -
Prci6g0287 345 Gene3D - 32 339 - -
Prci6g0287 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
Prci6g0287 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 18 341 IPR044516 GO:0042732|GO:0048040|GO:0070403
Prci6g0287 345 FunFam UDP-glucuronic acid decarboxylase 6 32 341 - -
Prci6g0287 345 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0287 Prci-Chr6 1664704 1669721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0287 30 329 Miscellaneous Gene Families AT1G02000 24.179 5.03e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0287 K08678 - tcc:18590728 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2635 7 38344117 38347634 Prci6g0287 6 1664704 1669721 CCT