Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0282 ATGGCTTCGTCTTCCTCACTACTTTCTCTCATACTATCCGTCGCATCCTTCTTCGTCGCTAGTCTCGCCGACGCCACCATCTTAACCCTCGTCAACAACTGTAAGTTCACCGTCTGGCCCGCCGCCATCCAGCCCAACGCCGGCCACCCCGTTCTCGCTGGCGGTGGTTTCGTTCCCCTCCTCACTCATATCTCCATCCCCGTACCAGACCGACACTGGTCCGGTCGGGTATGGGCTCGAACGGGTTGCGGCTACTCCGGCAACCAGTTCAACTGCGCCACCGGCGACTGCGGAGGTCACCTTCAGTGCAATGGTGCCGGCGGCGCACCTCCGGCGCTCTGGCTCAGTTTCAGCATACACCACGGTCAACACGACTACTCCTCTTACGGTGTCAGCCTCGTGGACGGCTTCAACGTCCCGATGACGGTGACCCCACACGAGGAAGGCGTGTGTCCAGTGGTGGGGTGTCGCGTGGATCTGCTTTCGACGTGTCCTCCCGGGTTGCAGCACCGTGTGCCGCAGGGTCATGGTCCGGTGATGGCGTGTAAGAGCGGGTGCGAGGCTTTCAGGACGGACGAACTATGCTGCAGGAACCACTACAACAGCCCACAGATGTGTAAACCGTCAATATATTCAGATTTCTTCAAGCACGCGTGCCCTGCCACCTTCACTTACGCTCATGACAACCCTTCGCTGATGCACGAGTGTTCTTCCCCGAGGGAGCTTAAGGTGATTTTCTGCCATTAG 747 0.589 MASSSSLLSLILSVASFFVASLADATILTLVNNCKFTVWPAAIQPNAGHPVLAGGGFVPHXLTHISIPVPDRHWSGRVWARTGCGYSGNQFNCATGDCGGHLQCNGAGGAPPALWLSFSIHHGQHDYSSYGVSLVDGFNVPMTVTPHEGXGVCPVVGCRVDLLSTCPPGLQHRVPQGHGPVMACKSGCEAFRTDELCCRNHYNSPQMCKPSIYSDFFKHACPATFTYAHDNPSLMHECSSPRELKVIFCH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0282 250 SUPERFAMILY Osmotin, thaumatin-like protein 27 249 IPR037176 -
Prci6g0282 250 Gene3D Thaumatin 26 249 IPR037176 -
Prci6g0282 250 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Prci6g0282 250 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Prci6g0282 250 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Prci6g0282 250 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Prci6g0282 250 FunFam THAUMATIN-LIKE PROTEIN 1 26 250 - -
Prci6g0282 250 PANTHER OS03G0233200 PROTEIN 16 249 IPR001938 -
Prci6g0282 250 PIRSF PR5 1 250 IPR001938 -
Prci6g0282 250 SMART tha2 28 250 IPR001938 -
Prci6g0282 250 CDD TLP-PA 27 249 - -
Prci6g0282 250 ProSiteProfiles Thaumatin family profile. 25 250 IPR001938 -
Prci6g0282 250 Pfam Thaumatin family 32 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0282 Prci-Chr6 1634427 1635487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0282 1 249 Receptor kinase-like Gene Family AT5G38280 35.039 1.45e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0282 - - gmx:100818233 401.364