Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0202 ATGGATGAGAGGGGTAACTTATTTTCGCCTGGAGATGGGAGGAGAATGCTAATTTTCAATTTCTTCAAGGATGCCAGACTAGTTTTCAAATCTGACAATCTTGGTCGAGAAATATCGTCCATCGCATTGCCTGCAGCCCTGGCTTTGACAGCAGACCCTATTGCTTCACTGGTTGATACTGCATTTATTGGCCAAATAGGTCCTGTGGAGCTCGCTGCTGTAGGTGTTTCCATAGCATTATTCAACCAAGTATCAAGGATTGCGATATTCCCACTTGTCAGTGTCACGACTTCTTTTGTGGCTGAGGAAGATACTCTCGGTGGGGTGAGTTCTCATGTGGAAAATGATAACTTGGAAGAAGGTGCACCTATGGATGCTGAAACCAAAGAGTTTATACCACAAAAAGATACATGTGCAGATGTTCATGACTCAGATTTGGTTGGTGGCAGCTTTAATATAGTTAAAGCAGAGCATAAGAGAAGGAATATCCCTTCAGCTTCATCAGCTCTTGTTATTGGTGGCGTTCTTGGCATTATCCAAGCAATATTCCTCATTTCTGCTGCAAAACCTTTGATGAATTTCATGGGAGTAAAATCCGACTCCCCTATGCTAAACCCAGCTCAGCAGTACCTGACATTGAGGTCCCTTGGTGCTCCTGCTGTGCTTCTTTCATTAGCTATGCAGGGAGTCTTTCGAGGATTTAAAGACACTAGAACTCCTTTATTTGCTACAGTGGCTGGAGATCTTACCAACATAGCACTAGATCCTATATTCATGTTTGTATTCCGCCTGGGTGTCAGTGGTGCAGCAATTGCCCATGTTATATCTCAGTACCTAATTTCAGTCATACTCCTGTGGAGATTGATTGGACAAGTTGATCTTATCCCTCCTTCCATGAAGCATCTACAGTTTGATCGATTTCTTAAAAACGGTTTTCTATTATTAATGAGAGTCATTGCTGTTACATTCTGTGTGACACTTTCTGCATCACTAGCTGCACGGCAAGGGTCAACATCCATGGCTGCATTTCAAGTCTGCTTGCAGGTTTGGTTGTCAACATCTCTTCTTGCTGATGGTCTGGCCGTTGCTGGGCAGGCAATCCTTGCTGGTGCATTTGCTAATAAGGATCACGACAGGGCTATAGCAACTGCAACCCGAGTGCTACAGATGGGCTTGGTTCTGGGATTGGGGCTTGCAATTTTCCTCGGAACAGGGCTGCATTTTGGAGCTAAACTATTTACGAAAGATATTAATGTCCTCCACCTTATCAGCATTGGAACTCCGTTTGTTGTGGCCACTCAACCCATCAATTCTTTGGCGTTTGTATCTGATGGAGTTAACTTTGGGGCTTCTGACTTTGCCTATTCAGCCTTCTCAATGGTTGTGGTGGCAATTGTCAGCATCGGTTTTCTACTCATGTTGTCCTCTGCTGGTGGCTTCATTGGTATCTGGGTTGCTTTGACCCTTTATATGAGTCTCAGGGCATTTGCTGGCTTCTTGAGGATTGGAACGGGATCAGGGCCTTGGGGCTTCCTTAGGAGCTGA 1545 0.4466 MDERGNLFSPGDGRRMLIFNFFKDARLVFKSDNLGREISSIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTLGGVSSHVENDNLEEGAPMDAETKEFIPQKDTCADVHDSDLVGGSFNIVKAEHKRRNIPSASSALVIGGVLGIIQAIFLISAAKPLMNFMGVKSDSPMLNPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTRTPLFATVAGDLTNIALDPIFMFVFRLGVSGAAIAHVISQYLISVILLWRLIGQVDLIPPSMKHLQFDRFLKNGFLLLMRVIAVTFCVTLSASLAARQGSTSMAAFQVCLQVWLSTSLLADGLAVAGQAILAGAFANKDHDRAIATATRVLQMGLVLGLGLAIFLGTGLHFGAKLFTKDINVLHLISIGTPFVVATQPINSLAFVSDGVNFGASDFAYSAFSMVVVAIVSIGFLLMLSSAGGFIGIWVALTLYMSLRAFAGFLRIGTGSGPWGFLRS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0202 514 CDD MATE_DinF_like 34 504 IPR044644 -
Prci6g0202 514 NCBIfam MATE family efflux transporter 44 484 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci6g0202 514 Pfam MatE 165 257 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci6g0202 514 Pfam MatE 316 469 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci6g0202 514 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 16 513 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0202 Prci-Chr6 1127743 1133134 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0202 K26938 - gmx:100780165 788.875