Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0175 ATGACTGCAGTTTCTGTGCTCATCATAGTCACTGCACTCTCACTTTGCTCCCTCGTGCAGTCCTGCCCTCCGTCCGAATGGGCGGCTCTCATGGCCTTCAAGGCTTCTTTGAATGAGCCCCGCGTCGGCCTCTTCCGTTCCTGGAGAGGCACCAACTGTTGCTACCGCTGGTACGGCGTCCGCTGCGACCCCGCCACTCGCCGCGTCGTCGACATCACCCTCCGCGGCCTCCTCGACGACCCTGTCTTCCGGCACGTCAATCGCACCGGCTACATGTCCGGTTCCATCTCCCCTTCCGTCTGCAACCTCACCCAACTCTCCACTCTTTCAGTCTCCGACTGGAAGGCCATTTCCGGCCCCCTCCCTCGCTGCATCCCTTCCTCCCTGCCTCTCCTTCGAATCCTTGATCTCTCTGGCAACATGCTGTCCGGCGACATTCCCCGCGACATTGGGCGGCTCCGCCAGCTCGCCATGCTTAACCTCGCTGATAATCATCTCTCCGGGAGCATCCCTGGCAGTCTGGTGAATCTCTCCAGTTTAACGCACCTTGACCTCAGGAACAACGCGCTGGGGGGTCCCATTCCGCGGGACATCGACAGGCTCCGAATGCTGAATCGGGCTTTGTTGAGCCGCAACCGGATCACCGGCCGGATCCCCTGGCGGATATCGAGAATATATCGGCTCGCGGATTTGGACCTGTCGCTGAATCGGATATCGGGGAGGATTCCGGAGGCGCTGGGTGAAATGGCGGTTCTGGATACGCTGAAGTTGAAGTATAATAGGATAAGAGGGGGTGTGCCGGCGAGTTTGCTGAGGTCGAGAATGAGTCAAATAGATTTGAGCAGAAACGAGCTAGTGGGGCATATAGCGGACGTGTTTCGCGAAGGAACGTATTTTATAAATCTGGATTTATCGCACAACAAATTGAGGGGCAGTATCCCCAAGTCGATGAAGTCGGCCCAGTATATGGGTCGCTTGGATTTGAGTCACAACCGTCTTTGCGGGCGCATTCCCAGTGGTTCACCTTTTAACCACCTCGATGCCTCCTCCTTCCATAACAATCTCTGTCTCTGTGGAAGCCCCTTCAAACCTTGCTGA 1098 0.5674 MTAVSVLIIVTALSLCSLVQSCPPSEWAALMAFKASLNEPRVGLFRSWRGTNCCYRWYGVRCDPATRRVVDITLRGLLDDPVFRHVNRTGYMSGSISPSVCNLTQLSTLSVSDWKAISGPLPRCIPSSLPLLRILDLSGNMLSGDIPRDIGRLRQLAMLNLADNHLSGSIPGSLVNLSSLTHLDLRNNALGGPIPRDIDRLRMLNRALLSRNRITGRIPWRISRIYRLADLDLSLNRISGRIPEALGEMAVLDTLKLKYNRIRGGVPASLLRSRMSQIDLSRNELVGHIADVFREGTYFINLDLSHNKLRGSIPKSMKSAQYMGRLDLSHNRLCGRIPSGSPFNHLDASSFHNNLCLCGSPFKPC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0175 365 Gene3D Ribonuclease Inhibitor 87 365 IPR032675 -
Prci6g0175 365 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 196 289 - -
Prci6g0175 365 Gene3D Ribonuclease Inhibitor 20 80 IPR032675 -
Prci6g0175 365 Pfam Leucine Rich Repeat 179 200 IPR001611 GO:0005515
Prci6g0175 365 Pfam Leucine Rich Repeat 132 152 IPR001611 GO:0005515
Prci6g0175 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 5 112 - -
Prci6g0175 365 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 128 195 - -
Prci6g0175 365 SUPERFAMILY L domain-like 21 364 - -
Prci6g0175 365 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0175 Prci-Chr6 990893 992676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0175 89 365 Receptor kinase-like Gene Family AT4G08850 31.270 3.28e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0175 - - cit:102626175 459.529