Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0162 ATGTCTTCTTCAACCGCCCCGGCCACTACCAGCGACTCCTCTGACCTCTTTGAAACACCCATATTAGACAGCGAGTTTTCCGCTCTCCTCCACGCCATTTCCGAGCATGGAGGCTATGCTTTTGTCAGCATGGCTACCCTCGCCACCCTCGGCGACTTTCGAGCCGCCGAGGCTGCCCGTGAGATGGCCTGGGAGCAGCTACACTCAGGGCCTCGTCACTCTGTCCTCCCAGTTTGGCGCGACGCCTACTCTATGGCTTGCCTTCACGTGGCCAAGCACCATTACAGCAGCGGTGACTTCAAGGAGGCTCTTAGGGCTTTGGATATGGGACTGATCATGGGGGGATCGCTTCTAAAGAATGACCTGAGCTCTGCTGTTGGCAGAGTCTCGGAGAGGGTCAGGAACATTAGGGCTTCCGGAGAAAGCCACGAAGGCTTCGGGAAGTCCGAGCAGCGACTTCTCGATCACGAACTTAATCAGGCCGAGGTGTACAAACTTCTACCCTTGAACTCCCTTTCTCATAAAATCGTGGAGAAGAGGTCTGCTCTGTCATTGGAAAGGTTCCTGGAAGATTATTATCGGTCTGGTTCCCCGGTTATCATCAGTGATTGTATGGCTCACTGGCCAGCCAAGACAAAATGGAATGACATAGACTATTTGAAAAGGATTGCTGGTGATCGCACAATTCCAGTTGAGGTTGGAAAAAACCATTTATGTGCACAGTGGAAGAAAGAGTTAATTACATTTTCAGAGTTTCTTCAACGTATTGAGTCCCATGGCTGCTCTTCTGTGGGTCCTACATATCTTGCTCAGCATCCGCTATTTGATCAGATAAATGAGCTTCGGAAAGATATTTGTATTCCTGACTATTGTTTTGCTGGCGAAGGGGAGCTAAGGTGTCTCAATGCTTGGTTTGGTCCTGCTGGGATAGTAACACCATTACACCATGATCCACACCATCATATACTAGCTCAGGTTGTGGGGAAGAAATATGTGAGGCTCTACTCTGCATCTTTGTCTAAGGAACTTTACCCTTACATCAAAACAACGCTCACGAATTCCAGCCAGATTGATCCAGATAGCATAGATGAAAAGATGTTTCCTGGGGTGCAAGACTTGGAATTCGTAGACTGTATATTAGAGGAGGGTGAATTACTATATATCCCGCAAAAATGGTGGCACTATGTCCGCTCTCTAACTACAAGTTTCTCCGTTAGTTTTCGGTGGAGTAAGTCCGAAGGTTCAGCTACATCCTGA 1257 0.4837 MSSSTAPATTSDSSDLFETPILDSEFSALLHAISEHGGYAFVSMATLATLGDFRAAEAAREMAWEQLHSGPRHSVLPVWRDAYSMACLHVAKHHYSSGDFKEALRALDMGLIMGGSLLKNDLSSAVGRVSERVRNIRASGESHEGFGKSEQRLLDHELNQAEVYKLLPLNSLSHKIVEKRSALSLERFLEDYYRSGSPVIISDCMAHWPAKTKWNDIDYLKRIAGDRTIPVEVGKNHLCAQWKKELITFSEFLQRIESHGCSSVGPTYLAQHPLFDQINELRKDICIPDYCFAGEGELRCLNAWFGPAGIVTPLHHDPHHHILAQVVGKKYVRLYSASLSKELYPYIKTTLTNSSQIDPDSIDEKMFPGVQDLEFVDCILEEGELLYIPQKWWHYVRSLTTSFSVSFRWSKSEGSATS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0162 418 ProSiteProfiles JmjC domain profile. 261 418 IPR003347 -
Prci6g0162 418 FunFam lysine-specific demethylase JMJ30 176 409 - -
Prci6g0162 418 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 81 413 - -
Prci6g0162 418 Pfam Cupin-like domain 187 409 IPR041667 -
Prci6g0162 418 Gene3D Cupin 175 410 - -
Prci6g0162 418 SUPERFAMILY Clavaminate synthase-like 178 410 - -
Prci6g0162 418 SMART cupin_9 267 416 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0162 Prci-Chr6 912360 916352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0162 171 396 Acyl Lipid Metabolism Gene Families AT3G45880 27.007 2.81e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0162 K24444 - gmx:100813075 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0162 6 912360 916352 Prci6g0162 6 912360 916352 ECH