Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0149 ATGCTGAAGCTTCCGACGAGCACACAGTCAAGTTGTGGGTATAGCTATCTGGTGTTTCAGAAGCCATGGATAAATCTCCAGGGCGGCAAAATTCCTCTACTGTTGGGACGCTCAATCCCAAACCAAAAGAAACAGAAGAGGGTGGTTAGGGTTCGATGCTGCAGCAGTGGCATGAACGTCAAAGCCGTGGCCACCATAGGTGAAGGCGGAAGAGAAAACACGGAGAACAAATCAGCCAAGGTTAAAGTCACTTTAACAGTTCTGCAAACTGTTGAAGGGTACTTTTCGGAAGTCGGTTTCAACCGAGGGATCGACGATATCGCTGAGTTTCTCGGTAAATCTCTTCAAGTGGAGCTCCTTAGCGCCCAGCTTGAACCCAAGACGGGATTAGAGAAGGAGGCGATAAAAGGGTTCGTGCACAGGACGGGGCAAGAGAATCAAGAGGTGAAGTACGAGGCAGTGGTAGAAGTGGGAAGCGAATTTGGGGAGATAGGGGCACTGCTGGTAGAGAATGAACACCACAAGGAGATTTTCCTCAAGGACGTCCTCCTCGAGGGCCTAGCTGCCGGCCCCCTCCGCTTTTCCTGTAACTCCTGGGTCCACTCCAAGCACCAGAGCCCCGTCAAGAGGGCCTTCTTCCCCAACAAGTCTTATCTGCCGTCGGAGACGCCGGAGGGCATCCGGAGGATAAGAGAGGAGGAATTGACCGTGGTGAGGGGCAACGGCACCGGAGAGAGGAAAAGCTACGAGAGAGTGTACGATTACGACGTGTACAACGACCTCGGAGATCCCGACAGCAAGGACGATCTCAAGAGGCCTGTTCTCGGCGGTCACCAGCACCCTTATCCCAGGCGCTGTAGGACCGGACGTCCCCGCTGCCACAAAGATCCATTATCAGAGAAAAGAAGCAGCAGCGTGTATGTGCCGAGAGACGAAGCCTTCTCAGAAGTGAAGCAGCTAACGTTTTCTACGAATGCGGTGTACTCAGTGTTGCATGCCGTGGTCCCTGCGCTGCAGACCACCCTGGTGGACAAGACTCTCGGCTTTCCCTTGTTCTCCTCCATTGATTCTCTTTTTAACGAAGGGGTTAACTTGCCTCCCCTTAAAACCCAAAGCTTTCTCAGGACCCTTTTGCCTCGCCTCGTCAAGTTCATCAATGATGCCGAACAAGACATTCTCCGTTTCGAGACGCCCTCCACTATGGACAAGGACAGGTTCTTTTGGTTTAGGGACGAGGAATTCGCCAGGCAAATTCTTGCAGGTCTCAACCCTTGCAGCATCCAATTGGTCACGGAGTGGCCGTTGAAAAGTACATTAGATCCCAAGATCTATGGCCCCCAGGAATCAGCAATCACCACTGAAATCGTCGAGAGAGAAATAAGAGGTTTTGCCACTGTCGAAGAGGCCATAAAGCACAAGAAGTTGTTCATCCTCGACTACCATGATCTGTTACTACCATATGTGGAGAAGGTCAGACAACTTGAAGGCACCACTCTATATGGCTCCAGGACACTGTTCGTCCTGACCCCAGACGACACTTTGAGGCCTTTGGCCATCGAGCTTACTCGGCCACCTATGGGGGACAAGCCGCACTGGAGGCAAGTTTTCACGCCGGGCTGGCACTCAACCAGTGTTTGGCTTTGGAGGCTCGCCAAAGCCCACGTCCTTGCCCATGACTCCGGCTACCACCAACTCGTCAGTCACTGGCTGCGCACCCATTGTTGTACGGAACCATATATCATTGCGACCAACAGGCAGCTTAGTGCAATGCACCCGATCTATAGGCTACTGCATCCCCACTTCAGATACACGATGGAGATAAACGCTCTTGCTCGTCAGGCCCTCATAAACGCAGGTGGAATAATAGAGAGCTGCTTCACTCCTGGAAAATACTCCATCGAACTTAGCTCGGTCGCCTACGACAAGCTGTGGCAATTCAATTTACAAGCCCTGCCCGCCGACCTAATCAACAGGGGATTGGCGGTGGAGGACCCCAATGCTACCCACGGCTTAAAGCTGATGATTGAGGACTACCCTTATGCCAACGACGGCCTCGTTCTTTGGGACGCCATCAAACAGTGGGTTACCGACTATGTCGATCGCTACTACCCAGACCCGACTTTGATCGAATCGGACTATGAGCTCCAGGCTTGGTGGGAAGAGATCCGAACCGAAGGCCACGCGGATAAAAAGGACGAGCCTTGGTGGCCGGTTCTTAAAACACCCAAGGATCTCGTGGAAATCGTGACCACCATTGTTTGGATAACATCGGGACACCACGCGGCGGTTAATTTCGGGCAGTACGCGTATGCCGGGTATTTCCCCAACCGACCCACGATTGCCAGAACTAATGTGCCGACGGAGGACCCGTCCGGCACGGAATGGGAACTTTTCTTGGAGAGGCCAGAGCATGCGCTATTGAGGTGCTTTCCTTCTCAAGTTCAGGCGACGACGGTGATGTCGGTGCTAGACATTCTGTCAAGTCACTCGCCGGACGAAGAGTACCTGGGGAGCGTGATCGAGCCGTCGTGGGAGGAGGATCCGATGGTGAAAGCTGCGTTCGAGCAGTTTCAAGGACGGCTGAAAGAGCTGGAAGGGTTGATCGATAAGAGGAACGCAGATCCAAATCTGAGGAACCGAAACGGCGCCGGGGTTGTGCCGTATGAGCTTTTGAAGCCGTTTTCTGAAGAACCAGGAGTTACTGGAAAGGGAGTTCCGTACAGTATCTCCATTTGA 2736 0.5292 MLKLPTSTQSSCGYSYLVFQKPWINLQGGKIPLLLGRSIPNQKKQKRVVRVRCCSSGMNVKAVATIGEGGRENTENKSAKVKVTLTVLQTVEGYFSEVGFNRGIDDIAEFLGKSLQVELLSAQLEPKTGLEKEAIKGFVHRTGQENQEVKYEAVVEVGSEFGEIGALLVENEHHKEIFLKDVLLEGLAAGPLRFSCNSWVHSKHQSPVKRAFFPNKSYLPSETPEGIRRIREEELTVVRGNGTGERKSYERVYDYDVYNDLGDPDSKDDLKRPVLGGHQHPYPRRCRTGRPRCHKDPLSEKRSSSVYVPRDEAFSEVKQLTFSTNAVYSVLHAVVPALQTTLVDKTLGFPLFSSIDSLFNEGVNLPPLKTQSFLRTLLPRLVKFINDAEQDILRFETPSTMDKDRFFWFRDEEFARQILAGLNPCSIQLVTEWPLKSTLDPKIYGPQESAITTEIVEREIRGFATVEEAIKHKKLFILDYHDLLLPYVEKVRQLEGTTLYGSRTLFVLTPDDTLRPLAIELTRPPMGDKPHWRQVFTPGWHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPIYRLLHPHFRYTMEINALARQALINAGGIIESCFTPGKYSIELSSVAYDKLWQFNLQALPADLINRGLAVEDPNATHGLKLMIEDYPYANDGLVLWDAIKQWVTDYVDRYYPDPTLIESDYELQAWWEEIRTEGHADKKDEPWWPVLKTPKDLVEIVTTIVWITSGHHAAVNFGQYAYAGYFPNRPTIARTNVPTEDPSGTEWELFLERPEHALLRCFPSQVQATTVMSVLDILSSHSPDEEYLGSVIEPSWEEDPMVKAAFEQFQGRLKELEGLIDKRNADPNLRNRNGAGVVPYELLKPFSEEPGVTGKGVPYSISI 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0149 911 Gene3D - 337 424 IPR027433 -
Prci6g0149 911 PRINTS Lipoxygenase signature 545 562 IPR013819 GO:0016702|GO:0046872
Prci6g0149 911 PRINTS Lipoxygenase signature 583 603 IPR013819 GO:0016702|GO:0046872
Prci6g0149 911 PRINTS Lipoxygenase signature 563 580 IPR013819 GO:0016702|GO:0046872
Prci6g0149 911 Gene3D - 560 909 - -
Prci6g0149 911 FunFam Lipoxygenase 542 910 - -
Prci6g0149 911 CDD PLAT_LH2 80 215 IPR042057 -
Prci6g0149 911 Gene3D - 237 335 - -
Prci6g0149 911 Gene3D PLAT/LH2 domain 80 236 - -
Prci6g0149 911 ProSitePatterns Lipoxygenases iron-binding region signature 2. 590 600 IPR020834 GO:0016702|GO:0046872
Prci6g0149 911 PRINTS Plant lipoxygenase signature 210 231 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 823 837 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 432 451 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 249 265 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 500 524 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 346 367 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 393 409 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 184 202 IPR001246 GO:0016491
Prci6g0149 911 PRINTS Plant lipoxygenase signature 281 300 IPR001246 GO:0016491
Prci6g0149 911 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 80 218 IPR036392 GO:0005515
Prci6g0149 911 FunFam Lipoxygenase 425 559 - -
Prci6g0149 911 ProSiteProfiles PLAT domain profile. 94 214 IPR001024 GO:0005515
Prci6g0149 911 MobiDBLite consensus disorder prediction 264 283 - -
Prci6g0149 911 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 217 911 IPR013819 GO:0016702|GO:0046872
Prci6g0149 911 ProSitePatterns Lipoxygenases iron-binding region signature 1. 563 577 IPR020833 GO:0016702|GO:0046872
Prci6g0149 911 Gene3D - 425 559 - -
Prci6g0149 911 PANTHER LIPOXYGENASE 79 911 IPR000907 GO:0016702|GO:0034440|GO:0046872
Prci6g0149 911 SMART LH2_4 79 215 IPR001024 GO:0005515
Prci6g0149 911 Pfam Lipoxygenase 227 893 IPR013819 GO:0016702|GO:0046872
Prci6g0149 911 Pfam PLAT/LH2 domain 144 213 IPR001024 GO:0005515
Prci6g0149 911 SUPERFAMILY Lipoxigenase 219 911 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0149 Prci-Chr6 825813 833499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0149 160 911 Acyl Lipid Metabolism Gene Families AT3G45140 61.508 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0149 K00454 - cave:132163184 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0149 6 825813 833499 Prci6g0149 6 825813 833499 ECH