Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0061 ATGGCTGTGAACGATGCTGATCAATCACATAAGCCTCACAGGTCTCGTCAGTCTGGTGCAAAGAAGGTCAAATCGGATAAGAAGAAGAAGAAGAAGCAAGAAGCTGCCGCTGACAATCGCAAACAAAATCCCAAGGCATTTTCTTTTGCGTCTTCCGCGAAAGCCAAAAGATTACAATCCCGTGCCGTCGAAAAAGAGCAGCGTCGTCTTCATGTTCCGATTATTGACCGGTCTTATGGGGAGCCAGCACCTTATGTCGTTGTGGTGCAGGGCCCTCCGAAGGCTGGGAAGTCACTCTTAATAAAGTCTTTGGTAAAACATTATACGAAGCATAATTTGCCAGATGTTCGAGGTCCGATAACCATTGTATCAGGAAAGCAGAGGCGACTGCAGTTTGTGGAATGCCCAAATGATATCAATGGCATGATAGATGCTGCAAAATTTGCAGATCTAGCATTGCTTCTCATAGATGGGAGTTATGGTTTTGAAGTGGAAACCTTTGAATTCCTTAACATATTACAAGTTCATGGGTTCCCAAAGGTCATGGGTGTTCTGACTCATCTTGATAAATTCAAGGATGCTAAAAAGTTGAAGAAAACCAAGCAACGTCTTAAACACCGTTTCTGGACTGAAATATATGATGGAGCTAAACTGTTTTATTTATCTGGTCTTATTCATGGAAAGTATCCAAAGCGTGAAGTGCACAATCTTGCCCGCTTTATTTCTGTTATGAAGTTTCATCCTCTATCTTGGCGAACTTCCCACCCTTACATTTTGGTGGATCGGTTTGAAGATATCACTCCTCCTGAAAGAGTGCTAGAAAATAAGAAATGTGACAGAAAAGTCACACTTTATGGTTATTTGAGAGGGTGTAATTTGAAAACGGGAACTAAGGTGCACATAGCAGGAGTGGGTGATCATTGTTTAGCTGGCATCACTTTGTTACCTGATCCTTGTCCTCTACCATCTGCTGCAAAGAAGAAGGGACTGCGAGATAGGGAGAAGTTATTCTACGCTCCCATGTCTGGCCTTGGGGATCTTCTATATGACAAAGATGCTGTGTACATAAATATTAATGATCACTTTGTCCAGTTTTCAAAAGTTGATGATGAAAACTCAGCCATGGCTGGCAAAGGAAATGACAGAGATGTAGGGGAGGTTTTGGTGAGATCACTTCAGAATACCAAATACTCAATCAACGAAAAACTAGAGAACAGCTCTATCAATCTTTTTAGCCAAAAGTCAAATGTGTCATCTGAAGCACTACATAATGCACAAGGTAGAAATGTAGAAAATAATAAAATGGATACGAATGGTTCAGAATCTGATCAAGATGAAGCCATTCCACTCAATGCCATCACAGACAGTGAAACTAGTGGATCTGATGAAGATAGTGACACAAGAGCTAGTAAAGCTGCGACCAGAGATCACTTAAAAGAATGTGTTGAATTTCATGGTGGAAGACTAAGGAGAAGAGCAGTGTTTGGAAGTGATGTTGATGAAAATGATTTGAAGAGTCATCTGACTCAGAATTTTCAGAAGAGAACCAATGATGATGATGATGATGATGATGCAGATGAAGATGGCGTGGGAGATGTTGCTAAGTGGAAAGAGTTGTTGGCCGAAAGAACTCTCTCTCGGCAAACTCCTAGCCTGATGCAATTTGTGTATGGGAAGTCTACTGTTAATTCAACTGATATGAAGAAAGAGGATGACAGTAGTGAGGATGAAGAAAGTGAAGATGAATTTTTTAAACCTAAAGAAGAAGTTAAGAAGCAAAAAATGAGAGAGGGACCAGATGGTGAAAATGTCAACACTGAGGACTGTTCCAAGACTGCAAAGTTTGTGGATGTTAAATGCTGGGAAGGCAAAGATTTTGAGCAAATCCGTGATCGTTTTGTTACTGGTGACTGGTCAAAAGCTGCACTTAGAAACCAGTTGTCTGATGCTACCACTGGAGATGAATTTGATGCTGTCTATGGTGACTTTGAAGATTTAGAAGCCGGAAAGAAGTATGAGAGTCATCAGAGAGGTAGTGAAGTTGCTGAAATAGTACAGAAGGGAGAGGACTTGGAAGCTGAAGAGCGGAGGCTCAAGAAACTTGCTCTCCGTGCAAAATTTGATGCTCAGTATGATAGCTTTGGATCATCTGAGGAAGAAGCTAGCGATAAAAATGGGGCCAAGTTTCATCATGGTCAAGCTAGTGAAAGTAGCTACTTTGACAAGTTGAAGGAAGAAATTGAACTACAGAAACAGATGAATATAGCTGAACTCAACGATCTTGACGAGGCTACAAGATTAGAGATAGAAGGCTTTCAAACTGGAAGTTACCTTAGATTGGAGGTTCATGATGCCCCTTATGAGATGGTTGAATGCTTTGATCCTTACCACCCAATATTAGTAGGAGGGATTGGTCTTGCAGAGGAAAATGTCGGATACATGCAGGCTAGGTTCAAGCGGCATAGATGGCACAAGAAAGTTCTCAAGACTAGAGATCCTATAATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACCCCGGTTTATGCTATTGAGGATTGTAATGGGAGGCACCGTATGCTTAAATACACCCCAGAACATATGCATTGCTTGGCTATGTTTTGGGGCCCTCTTGCCCCTCCAAACACTGGGATAGTTGCTGTTCAGAATTTATCCAACAATCAGGAATCATTTAGGATTACGGCAACTGCTGTTGTACTTGAGTTTAATCATGCAGCAAGGATAGTGAAGAAAATAAAGTTGGTTGGTTACCCTTGTAAGATATTCAAGAAGACAGCTCTTATCAAGGACATGTTCACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATAAGAACAGTTAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGATATCCATAAGCAGTCAAAGAATGGAGGCCAACCCAAAGAAGGAATTGCTCGTTGCACTTTCGAGGACAAAATTTTGATGAGTGACATTGTTTTCTTGCGTGCGTGGTCTCAAGTTGAAGTTCCTCAGTTTTTTAATCCCTTAACAACAGCATTGCAGCCTCGTGAGCAGACCTGGCGGGGAATGAAAACAGTTGCTGAATTGAGAAAGAATTTCAATCTTCCTGTACCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAGCCGCGGAAGTTCAATCCGTTGGTGATTCCCAAGTCTTTACAGGAATCACTTCCTTTTGCGTCAAAGCCTAAAGATATGCCTAGCCGGAAGCGGTGGTCACTTGCTGAGAGAAGGGCTGTTGTTTGGGATACTCATGAGCGTAAAGTTCATGCCCTTGTGCAACAGCTCCAATTAATTAGAAATGAAAAGTTGAAAAAGCGGAAGCTTAAGGAAGAGGAGAGGAGGAAAGAACATGAAGCTGAGAGAGCAAAAGATGAGCAGTTGCTGATAAAACGCCGAAGAGAGGAAAGGCGAGAGAGATATCGTGAGCAAGAAAAACTGAAGAAAATCCGGAGAGCAGAGGTCTGA 3525 0.4179 MAVNDADQSHKPHRSRQSGAKKVKSDKKKKKKQEAAADNRKQNPKAFSFASSAKAKRLQSRAVEKEQRRLHVPIIDRSYGEPAPYVVVVQGPPKAGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEVETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREVHNLARFISVMKFHPLSWRTSHPYILVDRFEDITPPERVLENKKCDRKVTLYGYLRGCNLKTGTKVHIAGVGDHCLAGITLLPDPCPLPSAAKKKGLRDREKLFYAPMSGLGDLLYDKDAVYININDHFVQFSKVDDENSAMAGKGNDRDVGEVLVRSLQNTKYSINEKLENSSINLFSQKSNVSSEALHNAQGRNVENNKMDTNGSESDQDEAIPLNAITDSETSGSDEDSDTRASKAATRDHLKECVEFHGGRLRRRAVFGSDVDENDLKSHLTQNFQKRTNDDDDDDDADEDGVGDVAKWKELLAERTLSRQTPSLMQFVYGKSTVNSTDMKKEDDSSEDEESEDEFFKPKEEVKKQKMREGPDGENVNTEDCSKTAKFVDVKCWEGKDFEQIRDRFVTGDWSKAALRNQLSDATTGDEFDAVYGDFEDLEAGKKYESHQRGSEVAEIVQKGEDLEAEERRLKKLALRAKFDAQYDSFGSSEEEASDKNGAKFHHGQASESSYFDKLKEEIELQKQMNIAELNDLDEATRLEIEGFQTGSYLRLEVHDAPYEMVECFDPYHPILVGGIGLAEENVGYMQARFKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDCNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQNLSNNQESFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEDIHKQSKNGGQPKEGIARCTFEDKILMSDIVFLRAWSQVEVPQFFNPLTTALQPREQTWRGMKTVAELRKNFNLPVPVNKDSLYKKIERKPRKFNPLVIPKSLQESLPFASKPKDMPSRKRWSLAERRAVVWDTHERKVHALVQQLQLIRNEKLKKRKLKEEERRKEHEAERAKDEQLLIKRRREERRERYREQEKLKKIRRAEV 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0061 1174 FunFam BMS1 ribosome biogenesis factor 85 247 - -
Prci6g0061 1174 SMART aarp2cn2 233 319 IPR012948 GO:0005634|GO:0042254
Prci6g0061 1174 Coils Coil 684 704 - -
Prci6g0061 1174 MobiDBLite consensus disorder prediction 1155 1174 - -
Prci6g0061 1174 Coils Coil 1111 1148 - -
Prci6g0061 1174 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 83 247 IPR030387 -
Prci6g0061 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 220 IPR027417 -
Prci6g0061 1174 MobiDBLite consensus disorder prediction 419 474 - -
Prci6g0061 1174 MobiDBLite consensus disorder prediction 1 66 - -
Prci6g0061 1174 PANTHER RIBOSOME BIOGENESIS PROTEIN 6 1157 IPR039761 GO:0042254
Prci6g0061 1174 MobiDBLite consensus disorder prediction 509 529 - -
Prci6g0061 1174 CDD BMS1 46 276 IPR037875 GO:0005525
Prci6g0061 1174 MobiDBLite consensus disorder prediction 563 607 - -
Prci6g0061 1174 MobiDBLite consensus disorder prediction 15 29 - -
Prci6g0061 1174 SMART DUF663_2 680 1008 IPR007034 -
Prci6g0061 1174 MobiDBLite consensus disorder prediction 1126 1148 - -
Prci6g0061 1174 MobiDBLite consensus disorder prediction 584 604 - -
Prci6g0061 1174 Gene3D - 85 247 IPR027417 -
Prci6g0061 1174 MobiDBLite consensus disorder prediction 419 458 - -
Prci6g0061 1174 Pfam AARP2CN (NUC121) domain 233 318 IPR012948 GO:0005634|GO:0042254
Prci6g0061 1174 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 687 1009 IPR007034 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0061 K14569 - gmx:100792176 1674.06