Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0059 ATGGCCGCATCCACGGCAGGCGGGAAGAAGATCAAAGCAACGCAGATAGTACTGTCTCAAGCCAAGACTCCAGATTCAATCAGACCCTCAGGAATGTTCAAGGATAACTCAAACTCAAAGGAATATTCGCCAAGGTATGAAAGGAGCTTCTCCTTCAATGATGCTGGCACAAGTGATCACCCAGCTAAGGCTGCAGAGGAAGATGTCCAGAGTACAAGTAAACCAGTCAATGTTGCCCATGTGAATAAGTTAAAAAAATCAAGTTCTAACATTGACAACTCATCTGAAGAAGTCCAGAAATCTTTCATGGGTGCAAGAGCTACAGACTCTGCACGAGTCATGAAGTTCACTAAGGCGCTTTCTGGGTCGACGGTAATATTAGAGAAGTTGCGTGAATTATCTTGGAGCGGAGTTCCAGATTACATGCGCCCTACAGTGTGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGACGGAGTTCTGAGAAGGAAGCGCCTGGAGTATCTTGACTGTGTTTCTCAGTATTATGATATTCCTGACACACAACGTTCGGATGATGAGATTAACATGCTTCGTCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGAAGTTTCATTCTTCCAGCAACCACAAGTTCAGAAATCATTGGAGCGCATTCTTTATACATGGGCCATTCGGCATCCTGCAAGTGGATATGTTCAAGGAATTAATGATCTTGTAACGCCGTTTTTAGTTGTTTTCCTATCAGAATACTTAGAAGGGAGTATAGACAATTGGTCAATGTCTGATTTATCATCAGATAAAATTTCAAATATAGAGGCTGACTGCTATTGGTGCTTGTCAAAGTTGCTTGATGGTATGCAAGACCATTACACATTCGCTCAACCAGGAATTCAGAGGCTTGTTTTTAAGTTGAAGGAATTGGTCAGAAGAATAGACGAGCCTGTTTCTAGACATGTGGAGGAACAAGGACTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAATTGTCTTCTTATTCGTGAGATACCCTTCCATCTCATCACACGCCTTTGGGACACATATCTTGCTGAAGGAGATGCCTTACCAGATTTCCTTGTGTATATATTTGCCAGTTTTCTTCTGACGTGGTCAGATAAGCTCCAAAAGCTTGATTTCCAAGAGCTGGTAATGTTCCTTCAACACCTTCCAACTCAAAACTGGTCTCACCAAGAGCTTGAGATGGTGCTCTCTCGCGCCTTCATGTGGCACAGCATGTTCAACAACTCTCCCAGCCATTTAGCTAGCTAA 1305 0.4314 MAASTAGGKKIKATQIVLSQAKTPDSIRPSGMFKDNSNSKEYSPRYERSFSFNDAGTSDHPAKAAEEDVQSTSKPVNVAHVNKLKKSSSNIDNSSEEVQKSFMGARATDSARVMKFTKALSGSTVILEKLRELSWSGVPDYMRPTVWRLLLGYAPPNSDRRDGVLRRKRLEYLDCVSQYYDIPDTQRSDDEINMLRQIAVDCPRTVPEVSFFQQPQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGSIDNWSMSDLSSDKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHVEEQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWSHQELEMVLSRAFMWHSMFNNSPSHLAS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0059 434 MobiDBLite consensus disorder prediction 1 74 - -
Prci6g0059 434 MobiDBLite consensus disorder prediction 16 56 - -
Prci6g0059 434 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 92 407 - -
Prci6g0059 434 FunFam TBC domain containing protein 167 298 - -
Prci6g0059 434 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 119 324 IPR035969 -
Prci6g0059 434 ProSiteProfiles TBC/rab GAP domain profile. 137 364 IPR000195 -
Prci6g0059 434 FunFam TBC1 domain family member 111 163 - -
Prci6g0059 434 Pfam Rab-GTPase-TBC domain 141 385 IPR000195 -
Prci6g0059 434 Gene3D - 299 434 - -
Prci6g0059 434 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 173 298 - -
Prci6g0059 434 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 300 422 IPR035969 -
Prci6g0059 434 FunFam TBC domain containing protein 299 434 - -
Prci6g0059 434 Gene3D - 114 165 - -
Prci6g0059 434 SMART tbc_4 134 390 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0059 Prci-Chr6 423437 434022 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0059 K20360 - qsu:112012707 732.25