Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0051 ATGGCCAAGCTGAGCGTTGCACTGGCGGCTGCTGCGGCGGCCATATTAGTTGCGGCGGTGAGTGGTCAGTCCGTCGCCGACATCGTCACGCCCGAGTTCTTCAATGCCATCATTGGCGAGGCCGATGCCAGCTGTGCCGGCAAGAACTTCTACACCCGAGCCTCCTTCCTCGACGCTCTCAACTCCTATTCTCAATTTGGCAACCTGGCTTCCGCCGACGACTCCAAACGTGAGATCGCCGCCGCTTTTGCCCACTTCACCCACGAGACCGGCCATTTTTGCTACATAGAAGAGATAGACGGCGCGATCAAGGATTATTGCGACGAGACCAACACGCAATACCCGTGCGCCCCCAACAAAGGATACTACGGTCGCGGGCCTATTCAGCTATCGTGGAACTTCAACTACGGGCCCGCCGGCGAGAGCAACGGGTTCGACGGGCTCAACGCTCCGGAAACGGTGGCCAACAATGCGGTGGTGTCATTCAAGACGGCTCTCTGGTACTGGATGCAACACGTTCGCCCCGTGGTGAGCCAAGGGTTCGGAGCCACCATCAGAGCCATCAACGGCCGCCTCGAATGTGACGGAGCCAACCCCACGACCGTCCAGGCTCGTGTTAATTACTACACCCAGTACTGCTCCCAGCTGGGTGTTGCTCCCGGTGATAATCTTACTTGCTAG 681 0.5859 MAKLSVALAAAAAAILVAAVSGQSVADIVTPEFFNAIIGEADASCAGKNFYTRASFLDALNSYSQFGNLASADDSKREIAAAFAHFTHETGHFCYIEEIDGAIKDYCDETNTQYPCAPNKGYYGRGPIQLSWNFNYGPAGESNGFDGLNAPETVANNAVVSFKTALWYWMQHVRPVVSQGFGATIRAINGRLECDGANPTTVQARVNYYTQYCSQLGVAPGDNLTC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0051 226 CDD chitinase_GH19 29 226 - -
Prci6g0051 226 PANTHER CHITINASE-RELATED 21 226 - -
Prci6g0051 226 SUPERFAMILY Lysozyme-like 24 226 IPR023346 -
Prci6g0051 226 ProSitePatterns Chitinases family 19 signature 1. 45 67 IPR000726 GO:0004568|GO:0006032|GO:0016998
Prci6g0051 226 FunFam Endochitinase PR4 18 105 - -
Prci6g0051 226 Gene3D - 24 226 - -
Prci6g0051 226 PIRSF Endochitinase 3 226 IPR016283 GO:0004568|GO:0005975
Prci6g0051 226 ProSitePatterns Chitinases family 19 signature 2. 160 170 IPR000726 GO:0004568|GO:0006032|GO:0016998
Prci6g0051 226 Gene3D Endochitinase, domain 2 97 154 - -
Prci6g0051 226 Pfam Chitinase class I 28 174 IPR000726 GO:0004568|GO:0006032|GO:0016998
Prci6g0051 226 Pfam Chitinase class I 179 226 IPR000726 GO:0004568|GO:0006032|GO:0016998
Prci6g0051 226 FunFam Endochitinase (Chitinase) 97 156 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0051 21 226 Glycoside Hydrolase AT3G54420 76.699 2.46e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0051 K01183 - qsa:O6P43_000036 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0051 6 391640 392474 Prci6g0051 6 391640 392474 ECH