Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0049 ATGGCGACACTGACGGTGATGACATTGCTCGCTTCCCTCACAACCTCTCATTTCTTCCCCATTAGAAGAAGTTGGTGCAGGGACGCTATTGCGAGTCCCAATGGCAGAGGCATCTATCTTCACCACATGCAGTATGATCCGTGGGGAAGCTTCAAACTCTCTAATCCTCGCTGGGTAAATCTCGAAAGCTTTAATACCGCAATTTTGGCTCTTAATTCAGGTTTCGAAGCATCGATTACTGATTCAAGTGAAAGTTCGGCAATCTTAAAAAATGCCAAAATCGTTGTAGAATCTGAAGATGGAAATAAGCTACAACTAAGAGTGGACTTGACTGGGGATCAAACACAAAGGGTATTTAATCATGTCCTTACAAACTTAGCTCGCACTGCCCCACCAATTCCAGGATTTCGACGACGAAAAGGAGGAAAGACATCCAAGGTTCCAACCAGCTTTCTTCTGCAGATGCTTGGTGAAGAACGCATCACAAAGTTTGTTATACAAGAAATACTCAATTCAGCAATGGCCGTGAAAACCTAG 537 0.4376 MATLTVMTLLASLTTSHFFPIRRSWCRDAIASPNGRGIYLHHMQYDPWGSFKLSNPRWVNLESFNTAILALNSGFEASITDSSESSAILKNAKIVVESEDGNKLQLRVDLTGDQTQRVFNHVLTNLARTAPPIPGFRRRKGGKTSKVPTSFLLQMLGEERITKFVIQEILNSAMAVKT 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0049 178 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 60 175 IPR005215 GO:0015031
Prci6g0049 178 Pfam Bacterial trigger factor protein (TF) 93 174 IPR008881 GO:0006457|GO:0015031
Prci6g0049 178 Gene3D - 94 176 IPR036611 GO:0006457|GO:0015031
Prci6g0049 178 SUPERFAMILY Trigger factor ribosome-binding domain 93 174 IPR036611 GO:0006457|GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0049 Prci-Chr6 366296 369326 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0049 - - pcin:129313385 350.903