Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2458 ATGGAAAGCCAAAGGTGGAAAGAATACAACGGTGATAACCATCGGTTTTTGTCTGAATATGATGATCTCGTCCTAGATCGGTGCGTATCCAATAGAAAGCATAGCCCGCCCCTTCCGCCCTCTGCATTTCCTTCTAGCCTTGGCTACATCCGACATCCTGTCTCCAAAATGGACACTCTCGCTGGAATCGCAATCAAGTACGGCGTTGAGGTATCAGACATCAAAAAAATGAATGGCCTCGTTACAGACCTTCAGATGTTTGCTCTTAAAACTCTTCACATCCCACTACGGGGAAGACACCCTCCATCAGATGATTCCACTACTACAGGACACAGGACGCCGGATGAACTGTTTGATTTGCAACATTCTTTGACAACGGATTCTCCGCTGCGGAAGTCCTCCCCGGGTGGGAACTCTTTGCAAGGTTTCTATAGAATTAAACCGATGGACAAGAAAACCATATCCGATGACTTTCAGATGGCAGTGAACGGAAAAGGGGCTTCTAATTTCTCCGAAGATGTATCATCCTCGCAGAACTTAGCTTCGACCCACCAACCTCTGAGTCGTCACCGAAAATCTAAAAGTCTAGTTGATATCATTTTGAGCGAGATTGAGGAGCAGCCTGATATTTTGCCTGCTACCGAGGAGACGCTCTTGAGGGAGGATAATAGCGGCGCCTGTGGGTTTCCATCAAGAACAGGAAAAGGCCTGGCTCTCAGACAGAAATCAGCAAGCCGAGCTTCATTGACCACAGATTCTGAAGCTAGTGCCTCAAATTCTGGGCCACTTGCTTTGGAGGACATTTGCCGAACTGATAGCCCCTCTGGTGTTAAGAAATCATCGAGCACATCATGTTTATATGACGAGGCTAGATCCCCATCTATCTGGCCAACTTCAAAATGGAGTTTGAGACCAGATTTTCAGGCAAAGCCGAAGTTTGATGGCTTGCCCAAGCCCACAATTGGTCGAAGAAATAAAGCTGCAATCGATAAACATATATAG 1002 0.4661 MESQRWKEYNGDNHRFLSEYDDLVLDRCVSNRKHSPPLPPSAFPSSLGYIRHPVSKMDTLAGIAIKYGVEVSDIKKMNGLVTDLQMFALKTLHIPLRGRHPPSDDSTTTGHRTPDELFDLQHSLTTDSPLRKSSPGGNSLQGFYRIKPMDKKTISDDFQMAVNGKGASNFSEDVSSSQNLASTHQPLSRHRKSKSLVDIILSEIEEQPDILPATEETLLREDNSGACGFPSRTGKGLALRQKSASRASLTTDSEASASNSGPLALEDICRTDSPSGVKKSSSTSCLYDEARSPSIWPTSKWSLRPDFQAKPKFDGLPKPTIGRRNKAAIDKHI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2458 333 MobiDBLite consensus disorder prediction 169 186 - -
Prci5g2458 333 MobiDBLite consensus disorder prediction 243 282 - -
Prci5g2458 333 Pfam LysM domain 54 95 IPR018392 -
Prci5g2458 333 ProSiteProfiles LysM domain profile. 50 94 IPR018392 -
Prci5g2458 333 MobiDBLite consensus disorder prediction 169 193 - -
Prci5g2458 333 SUPERFAMILY LysM domain 50 95 IPR036779 -
Prci5g2458 333 MobiDBLite consensus disorder prediction 243 260 - -
Prci5g2458 333 CDD LysM 50 94 IPR018392 -
Prci5g2458 333 MobiDBLite consensus disorder prediction 308 333 - -
Prci5g2458 333 Gene3D LysM domain 41 106 IPR036779 -
Prci5g2458 333 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 33 262 IPR045030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2458 Prci-Chr5 41096483 41099794 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2458 - - pcin:129311168 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2458 5 41096483 41099794 Prci5g2458 5 41096483 41099794 ECH