Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2177 ATGGCGAGAAGATCAGTGTCACTTCTTAGACAGCTTTTCGATGGATCACAATCATCGAACACTCCCAACATCTTCTCATCATGCTCCCGATTTATTCCTTCCCGATCCGTGACTTACATGCCCCGACCTGGGGATGGGACTCCACGCGCCGTGACCCTTATTCCCGGCGATGGAATTGGACCACTCGTTACAGGCGCTGTTGAGCAAGTGATGGAGGCGATGCACGCGCCTGTGTACTTCGAAAAGTATGAAGTGCACGGTGACATGCCGAGAGTGCCGCAGGAGGTGATCGATTCGATAAAGAAGAACAAGGTTTGCTTGAAGGGTGGATTGGCTACACCCATGGGTGGTGGTGTGAGCTCGTTGAACGTGCAGCTAAGGAAAGAGCTTGATCTGTATGCTTCGCTCGTGAATTGCTTTAATCTTCCTGGCTTGCCAACGAGGCACGAGAATGTTGATATTGTCGTGATTAGGGAGAATACGGAGGGAGAGTATTCTGGCCTGGAACATGAGGTCGTTCCTGGAGTCGTTGAAAGCCTCAAGCTCTGTTATCGGTGGGATGCATTTTCCTCTGGTGAATTCAATTGTATCAAGATACAGGTAATCACAAAGTTCTGCTCAGAGCGTATTGCTAAATATGCCTTTGAGTACGCTTACCTAAACAACAGAAAAAAAGTGACTGCGGTGCACAAAGCAAATATTATGAAGCTGGCAGATGGTTTATTTTTGGAATCTTGTCGAGAAGTTGCCACAAAGTACCCTGGAATTAAGTATAATGAAATTATTGTGGATAATTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTGACCCCGAATCTTTACGGAAATCTAGTTGCAAATACAGCAGCAGGTATTGCTGGAGGCACTGGAGTAATGCCAGGAGGAAATGTTGGAGCAGATCATGCTGTGTTTGAACAAGGCGCTTCGGCAGGAAATGTTGGTAATGATAAATTATTGGAACAAAAAATAGCAAACCCAGTAGCACTGCTTCTCTCGTCGGCCATGATGCTCAGACATCTTCAATTTCCTGCATTTGCTGACCGCTTGGAAACTGCTGTGAAACGAGTCATTCTTGGGGGCAAACACCGGACAAAAGACCTCGGAGGGCAAAGCACAACTCAAGAGGTTGTCGATGCAGTGTTGAGTGCTTTAGACTGA 1194 0.4682 MARRSVSLLRQLFDGSQSSNTPNIFSSCSRFIPSRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKYEVHGDMPRVPQEVIDSIKKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKLCYRWDAFSSGEFNCIKIQVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNDKLLEQKIANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILGGKHRTKDLGGQSTTQEVVDAVLSALD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2177 397 Gene3D Isopropylmalate Dehydrogenase 38 395 - -
Prci5g2177 397 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 49 396 - -
Prci5g2177 397 SMART Iso_dh_2 50 392 IPR024084 -
Prci5g2177 397 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 38 396 - -
Prci5g2177 397 Pfam Isocitrate/isopropylmalate dehydrogenase 51 392 IPR024084 -
Prci5g2177 397 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 39 396 - -
Prci5g2177 397 NCBIfam isocitrate dehydrogenase (NAD(+)) 47 395 IPR004434 GO:0006099
Prci5g2177 397 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2177 Prci-Chr5 39086365 39089655 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2177 K00030 - qsa:O6P43_033532 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2177 5 39086365 39089655 Prci5g2177 5 39086365 39089655 ECH