Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2053 ATGGCTGCTTTGGTTCCAACACTGTTCCCACTATCTGCTGGTTCACCCCTTCGCTTTTATCATTTGCGAAAGCCTAAACCTTCCTTGCTTCTTATCTCCTGCTCAAGAAAAGCCCTATTTCGATCTAGTGGCACAATTGTATTCTCCGGTGGCCGGAATTTGATACCTCTTTCGATGGCAGCCACTGTTAACGATGAGTATCAGGCATATTCAGTGAAGCCTCTCAACTTACCTCTGACTTTCGTGCGCCTCGCTGTCTCTGTAGTGCTGTTTATTGGCTTTGGATTTTGCATTGGCATTCGTGTAAGTTCTGCTTCTCCGCCTACTCTTCCCGCCTCTTCTTCATCGCTTCAAGATAACCAGGCAACGGAAGATGAACATGAAGGAAGAGAACAGGATAACAACACGGAAGATATTCTAGATAAGGATTTAGAAGCAGCTTTTAATGCTTGGAAATCTAAAACGTATGCATTGACTGTGCCTCTCAGAATTGTTGCTCTACGCGGTTCTGTGCCTCCATCATGGATCAAGGACTTCATAAAATCTCAGGGGAGAAGGCTAAAGTTTAATGTGAAGTATAATACAAGTCTCGAGAGTATTTTCTCTAATCTGTCAATTCCGTTTACTAAAGGAAATATTGGGCCTGCCTCTGCTTTGGCAGCTGATATTGTTGGTATCGGTGACTCCTGGCTTAAATTTGCCATCAACAAAGCTATAATTGAACCAATACGTGATGTTGATGACCAGGATTGGTTTAAAGGCCTCGATGAGAGATGGAAGGTATACCTACGCAGGAATAGTGAGGGAGAAATTGATCCTAACGGTGACATATGGGCTGCTCCTTATCGATGGGGCTGCATGGTTATAGCTTACAAGAAAAACAAATTTCGGAAGCATAATTTGGCTCCTATAGAGGATTGGGCAGATTTGTGGCGGTCAGAACTTGCAGGAAGAATCTCTATGGTCGATTCTCCCAGAGAGGTTATTGGTGCAGTTTTGAAGTATATGGGAGCCTCATACAATACAAACGACATTAATTTGCAAGTAAATGGCGGGAGAGATGCTGTTAAGCACAATCTAGCCTTACTTGGAAAGCAGGTTCGGCTGTTTGACAGCGTTCACTATCTGAAAGCTTTTGGAGTTGGAGATGTGTGGGTAACTGTTGGATGGAGTAGCGACATCATTCCTATTGCCAAGCGCATGTCTAATGTCACAGTAGTTGTTCCAAAATCTGGAGCTAGCTTATGGGCAGATCTTTGGGCAATTCCAGCTGCCTCTCGGATTCAAACAAACCGGATTGGCGGCCGAATCCGGGGACCATCCCCACTAATCCATCAGTGGATAGAGTTCTGTCTGCAAGCTGCTAGAGCACTGCCCTTTAAACAAGAGGTGGTCCCAGGTGCCTCTCCTAATGCTCTTCATGTTCCTTCGGCTAATGTTCCCACCGAGCTTACAAAGGGTAAACCAAGACTAGATACCAATCTCATTGCCGGAGCCCCACCGCCTGAAATACTAGATCGGTGTGAGTTTCTTGAGCCATTGTTTGATTCAACGATATCAGATTACCGCTGGTTGCTTGCTACCATCCAAGAACCTAACCGTGGATTAGTACATAAAGCGCGCGAGTTTATTTCATCGATGACTAAATTTCCTGGTAAATCTGATCCAAAATTGGCTTGA 1680 0.447 MAALVPTLFPLSAGSPLRFYHLRKPKPSLLLISCSRKALFRSSGTIVFSGGRNLIPLSMAATVNDEYQAYSVKPLNLPLTFVRLAVSVVLFIGFGFCIGIRVSSASPPTLPASSSSLQDNQATEDEHEGREQDNNTEDILDKDLEAAFNAWKSKTYALTVPLRIVALRGSVPPSWIKDFIKSQGRRLKFNVKYNTSLESIFSNLSIPFTKGNIGPASALAADIVGIGDSWLKFAINKAIIEPIRDVDDQDWFKGLDERWKVYLRRNSEGEIDPNGDIWAAPYRWGCMVIAYKKNKFRKHNLAPIEDWADLWRSELAGRISMVDSPREVIGAVLKYMGASYNTNDINLQVNGGRDAVKHNLALLGKQVRLFDSVHYLKAFGVGDVWVTVGWSSDIIPIAKRMSNVTVVVPKSGASLWADLWAIPAASRIQTNRIGGRIRGPSPLIHQWIEFCLQAARALPFKQEVVPGASPNALHVPSANVPTELTKGKPRLDTNLIAGAPPPEILDRCEFLEPLFDSTISDYRWLLATIQEPNRGLVHKAREFISSMTKFPGKSDPKLA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2053 559 CDD PBP2_PotD_PotF_like_1 161 528 - -
Prci5g2053 559 Pfam Bacterial extracellular solute-binding protein 221 457 - -
Prci5g2053 559 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 81 529 - -
Prci5g2053 559 MobiDBLite consensus disorder prediction 111 136 - -
Prci5g2053 559 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 409 428 IPR001188 GO:0015846|GO:0019808|GO:0042597
Prci5g2053 559 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 323 342 IPR001188 GO:0015846|GO:0019808|GO:0042597
Prci5g2053 559 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 276 292 IPR001188 GO:0015846|GO:0019808|GO:0042597
Prci5g2053 559 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 305 319 IPR001188 GO:0015846|GO:0019808|GO:0042597
Prci5g2053 559 MobiDBLite consensus disorder prediction 121 136 - -
Prci5g2053 559 Gene3D - 285 436 - -
Prci5g2053 559 SUPERFAMILY Periplasmic binding protein-like II 162 427 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2053 - - qsa:O6P43_033436 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2053 5 38052500 38057951 Prci5g2053 5 38052500 38057951 ECH