LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g1743	ATGGTGATTGTAGCATCACTACCTGGCCGCAATCTCTTCTCCTCCTTACCTTCGACGCCGCCACCGTCCGACCCCACCGTCAACACCGCCACTCCTTCCCCTCCAATCCCAATTCCCAAATACCCACCTCCTCGTAGATCCCTCAAGTCCCAGAAACCCCCTCCTGAACCCTCAAAACCCGCATCGAATCCTGCCCTGAAGCTCCATCGCAACTCCAAGTACTACAAACCTGTCAAAGATGGCGTTATTACATCGGATGGCGATCGCTCGGTGGTCATTGGCGAGTCCGGAGTGTCCTATCTTCTTCCCGGAGCCCCATTCGAATTCCAGTATAGTTATTCCGAGACGCCGAAGGTAAAGCCGATGGCGATTCGAGAGCCGGCGTTCTTACCGTTCGCGCCGCCCACAATGCCAAGGCCTTGGACTGGTAAAGCGCCGTTGAAGAGCTCGAAGAAGAAAATTCCACTCTTTGATTCTTTCAATCCTCCCCCGCCGGGAACGAAAGGAGTGAAGCACGTTGAAATGCCAGGACCGTTTCCATCGGGGAAGTATCCACAGGAGGGGAAGACGAGGGAGGAGGTACTTGGGGAGCCTTTGAAGAAGTGGGAAATAAGAATGCTTGTTAAACCCATGTTGGGAAATAATCGCCAGGTTAATCTCGGAAGGGATGGATTCACACATAACATGTTGGAATTAATACATTCGCATTGGAAGCGAGCCCGTGTTTGTAAAGTTCGTTGCAAAGGGGTCCCAACCGTAGATATGGATAACGTTTGCTATCATCTTGAGGAGAAAACTGGGGGTAAAATAATCCATCGAGTTGGTGGCATAGTTTATCTTTTCCGTGGGAGAAATTACAACTATCGTACCCGTCCACAATATCCATTGATGCTCTGGAAGCCAGCTGCTCCTGTTTACCCAAAACTTATCCAAGAAGCTCCAGAAGGATTAACAAAAGCTGAAGCTGATGAATTCCGTAAGAAAGGAAAAAAGCTATTGCCAATATGTAAATTAGCTAAAAATGGAGTCTACGTTTCCCTTGTGAAAGATGTAAAACATGCTTTTGAAGGAAGTCCCTTGGTGAAGGTTGACTGCAAGGGGTTGGAACCCAGTGATTACAAGAAAATAGGAGCCAAGCTTAAGGAATTGGTTCCTTGTGTGCTGTTGTCTTTTGATGATGAACAGATATTGATGTGGAGAGGGAAGGATTGGAAATCAATGTACCCTCAAGCTCCTCCAGTTTTAAGGCTTCCTGAAGTTGGTATTTCAAGGAATTTGGACAATTCAGGTGAGGGTGAGGATGATCAAAATAAGGATGATAGCAACATGATGTCATCAAGCCCTAGAATGACGTCTCTGTGGAAGCGCGCGATAGAGTTGAGCAAAGCTCTGTTGCTGGATGAGATTATAGTTGATCCTGGCCTCTTGGAGAAGGTAGAGGAATTTGAGGTTGCTTCACAAGCCACTGAACACTCATCCCCAGCTTTCATATTGTCCAGTGAAGATGGTGATTCTACTGCCAAAGGTTCACTTGCAGACTTTGAAGAAGACAACACTTATCCTAGTGATAGCTTCGCAACTGAGGACGACGATGAGGATTATCTATATGACAACTATAATGAAAATGATGAGGATGAATCAAATAGTGTGGTGGATTCATCAGCCCCACCTGGATCGTTACCTATTGATTTAATTGCTGACAAGCTTAGAATGAGATCAGACAAATAA	1728	0.463	MVIVASLPGRNLFSSLPSTPPPSDPTVNTATPSPPIPIPKYPPPRRSLKSQKPPPEPSKPASNPALKLHRNSKYYKPVKDGVITSDGDRSVVIGESGVSYLLPGAPFEFQYSYSETPKVKPMAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKHVEMPGPFPSGKYPQEGKTREEVLGEPLKKWEIRMLVKPMLGNNRQVNLGRDGFTHNMLELIHSHWKRARVCKVRCKGVPTVDMDNVCYHLEEKTGGKIIHRVGGIVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKAEADEFRKKGKKLLPICKLAKNGVYVSLVKDVKHAFEGSPLVKVDCKGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPQAPPVLRLPEVGISRNLDNSGEGEDDQNKDDSNMMSSSPRMTSLWKRAIELSKALLLDEIIVDPDXLLEKVEEFEVASQATEHSSPAFILSSEDGDSTAKGSLADFEEDNTYPSDSFATEDDDEDYLYDNYNENDEDESNSVVDSSAPPGSLPIDLIADKLRMRSDK	576

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci5g1743	576	SMART	CRS1_YhbY_2	317	400	IPR001890	GO:0003723
	Prci5g1743	576	SMART	CRS1_YhbY_2	199	282	IPR001890	GO:0003723
	Prci5g1743	576	Pfam	CRS1 / YhbY (CRM) domain	317	400	IPR001890	GO:0003723
	Prci5g1743	576	Pfam	CRS1 / YhbY (CRM) domain	200	282	IPR001890	GO:0003723
	Prci5g1743	576	MobiDBLite	consensus disorder prediction	1	71	-	-
	Prci5g1743	576	MobiDBLite	consensus disorder prediction	523	549	-	-
	Prci5g1743	576	FunFam	CRS2-associated factor 1, chloroplastic	316	411	-	-
	Prci5g1743	576	MobiDBLite	consensus disorder prediction	494	576	-	-
	Prci5g1743	576	SUPERFAMILY	YhbY-like	198	292	IPR035920	-
	Prci5g1743	576	MobiDBLite	consensus disorder prediction	419	447	-	-
	Prci5g1743	576	ProSiteProfiles	CRM domain profile.	315	411	IPR001890	GO:0003723
	Prci5g1743	576	MobiDBLite	consensus disorder prediction	18	61	-	-
	Prci5g1743	576	FunFam	CRS2-associated factor 1, chloroplastic	198	293	-	-
	Prci5g1743	576	SUPERFAMILY	YhbY-like	317	408	IPR035920	-
	Prci5g1743	576	ProSiteProfiles	CRM domain profile.	197	293	IPR001890	GO:0003723
	Prci5g1743	576	PANTHER	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	49	569	IPR044599	GO:0000373
	Prci5g1743	576	MobiDBLite	consensus disorder prediction	154	187	-	-
	Prci5g1743	576	Gene3D	-	198	294	IPR035920	-
	Prci5g1743	576	Gene3D	-	317	411	IPR035920	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g1743	Prci-Chr5	35752116	35757183	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g1743	-		-	qsa:O6P43_025275	855.514

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci5g1743	5	35752116	35757183	Prci5g1743	5	35752116	35757183	ECH