LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g1712	ATGGCTGCAACAATTAAAAAGTGCATGATGCTGTGCTGTATCAGCAAGACTGTGTCGAAGGAAGACATGGCAGGACAGTCTTACGAAGAAGCCATTGCAGAGCTGAAGAAGCTTCTCAGTGAGAAAGCTGACCTCGGGGGCGTCGCCGCCGCAAAGATCAAGCAGCTGACAACCGAGTTGAGCGCCGCCGGTTCAAAGCAGTTTAACCCGGACGAGAGGATGCGAGCCGGCTTCACTCAATTTAAGAAAGAGAAATTCGAGAAGAATCCAGATTTGTTTCGGGAACTTGCCAAAGGCCAGAGCCCAAAGTTTTTGGTATTTGCATGCTCAGATTCCAGAGTTTGTCCGTCGCATGTACTGAATTTCCAACCGGGTGAGGCTTTTGTGGTGCGAAACATCGCCAACATGATCCCACCTTACGATAAGACTAAATATTCAGGAACAGGAGCAGCCATTGAATATGCAGTGTTGCATTTAAAGGTGGAGAATATAGTGGTGATTGGACATAGCTGTTGCGGAGGTATAAAGGGGTTAATGTCGATCCCAGATGATGGGACCACTTCAAGTGAATTTATCGAGCACTGGGTTCAAATCTGCAATCCGGCAAAGTCCAAGATTAAAGCAGACACAAAAAGCTTGAGTTTCTCGGAGCAGTGTACTAACTGCGAGAAGGAAGCAGTGAATGTGTCGCTTGGAAATCTGCTGAGTTATCCGTTTGTGAGAGATGGGGTCGTGAAGAAAACACTTTCACTAAAAGGTGCTCATTACGATTTTGTTAATGGCAACTTTGAGCTCTGGGATCTCGACCTCAATATTTCACCTCTTTCTCTTTAG	834	0.4616	MAATIKKCMMLCCISKTVSKEDMAGQSYEEAIAELKKLLSEKADLGGVAAAKIKQLTTELSAAGSKQFNPDERMRAGFTQFKKEKFEKNPDLFRELAKGQSPKFLVFACSDSRVCPSHVLNFQPGEAFVVRNIANMIPPYDKTKYSGTGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTSSEFIEHWVQICNPAKSKIKADTKSLSFSEQCTNCEKEAVNVSLGNLLSYPFVRDGVVKKTLSLKGAHYDFVNGNFELWDLDLNISPLSL	277

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci5g1712	277	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	109	116	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Prci5g1712	277	PANTHER	CARBONIC ANHYDRASE	50	269	IPR001765	GO:0004089\|GO:0008270
	Prci5g1712	277	Pfam	Carbonic anhydrase	105	262	IPR001765	GO:0004089\|GO:0008270
	Prci5g1712	277	FunFam	Carbonic anhydrase	59	277	-	-
	Prci5g1712	277	Gene3D	Carbonic anhydrase	63	275	IPR036874	GO:0004089\|GO:0008270
	Prci5g1712	277	SUPERFAMILY	beta-carbonic anhydrase, cab	72	271	IPR036874	GO:0004089\|GO:0008270
	Prci5g1712	277	CDD	beta_CA_cladeB	77	266	IPR045066	GO:0004089\|GO:0008270
	Prci5g1712	277	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	153	173	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Prci5g1712	277	SMART	Pro_CA_2	97	267	IPR001765	GO:0004089\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g1712	Prci-Chr5	35563297	35574405	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g1712	K01673		-	gmx:100803945	483.411

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci10g1702	10	12532581	12537244	Prci5g1712	5	35563297	35574405	CCT