Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1613 ATGGCTCTCTCTCGCTTTGCTTCTTCTTCTTCTTCGTCTAGATCTAATCTCCTTAGACCCATCTCCTCTGCATTCTCCTCCGCCCCTTCTCTCCGTCGTTCTATCTCCTCGGCCGATGACTCCTCTACTCTTACCATTGAGACCTCTCTTCCATTCACCGCCCACAATTGTGACACTCCCTCCCGCTCCGTCGACACCACTCCCAAGGAACTCATGTCCTTCTTCCGCGACATGGCCATCATGCGGCGGATGGAGATAGCCGCCGATTCCCTTTATAAGTCTAAGCTCATCCGAGGGTTCTGTCACTTGTACGATGGCCAGGAAGCGGTGGCCACTGGCATGGAGGCTGCCATTACGAAGAAGGATTGCATAATAACATCTTACCGTGATCATTGTACCTTCCTGGCTCGCGGTGGAACCCTGCTAGAGGTATATGCTGAGCTCATGGGTCGTCAAGATGGGTGTGCGAAGGGAAAGGGTGGCTCTATGCACTTCTATAGGAAGGAAGCTGGGTTCTATGGCGGTCACGGGATCGTTGGGGCTCAGATACCGCTTGGGTGTGGATTAGCTTTTGCTCAGAAGTACTCTAAGGATGAAAATGTGACCTTCGCTTTGTATGGTGATGGTGCGGCAAATCAGGGGCAGTTGTTCGAGGCGTTAAACATAGCCGCGCTCTGGGATCTCCCTGCCATTTTGGTCTGCGAGAATAATCATTACGGGATGGGGACGGCGGAGTGGAGAGCTGCTAAGAATCCTGCTTATTACAAGCGTGGTGATTATGTTGCTGGATTGAAGGTAGATGGCATGGATGTTCTTGCTGTAAAACAGGCATGCAAATTTGCAAAGGAGTATGCTTTGAAGAATGGGCCCATTGTTCTTGAATTGGATACCTACAGGTACCATGGCCATTCCATGTCTGATCCTGGCAGCACATATCGTACACGTGATGAGGTTTCTGGCGTGAGACAGGAACGTGATCCAATTGAGAGAGTAAGAAAGCTGTTATTGAAACATGAGATTGCTGCTGAAAAGGAATTAAAGGACATTGAAAAGGAAGTCAGAAAAGAAGTTGACGAAACTATAGCTAAAGCAAAGGAGAGTTCATTGCCGGATCCATCTGAATTATTCACCAATGTATATGTTAGTGGTTTAGGGACTGAGGCATTTGGGGTTGACAGGAAGGAAGTAAGAGTTACTTTACCATGA 1206 0.4851 MALSRFASSSSSSRSNLLRPISSAFSSAPSLRRSISSADDSSTLTIETSLPFTAHNCDTPSRSVDTTPKELMSFFRDMAIMRRMEIAADSLYKSKLIRGFCHLYDGQEAVATGMEAAITKKDCIITSYRDHCTFLARGGTLLEVYAELMGRQDGCAKGKGGSMHFYRKEAGFYGGHGIVGAQIPLGCGLAFAQKYSKDENVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKNPAYYKRGDYVAGLKVDGMDVLAVKQACKFAKEYALKNGPIVLELDTYRYHGHSMSDPGSTYRTRDEVSGVRQERDPIERVRKLLLKHEIAAEKELKDIEKEVRKEVDETIAKAKESSLPDPSELFTNVYVSGLGTEAFGVDRKEVRVTLP 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1613 401 CDD TPP_E1_PDC_ADC_BCADC 74 364 - -
Prci5g1613 401 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 62 382 IPR029061 -
Prci5g1613 401 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 36 383 - -
Prci5g1613 401 Pfam Dehydrogenase E1 component 77 372 IPR001017 GO:0016624
Prci5g1613 401 Gene3D - 27 395 - -
Prci5g1613 401 FunFam Pyruvate dehydrogenase E1 component subunit alpha 33 394 - -
Prci5g1613 401 Coils Coil 339 359 - -
Prci5g1613 401 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 69 381 IPR017597 GO:0004739|GO:0006086|GO:0043231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1613 Prci-Chr5 34954038 34958785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1613 1 401 Acyl Lipid Metabolism Gene Families AT1G24180 77.114 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1613 K00161 - zju:107428751 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1613 5 34954038 34958785 Prci5g1613 5 34954038 34958785 ECH