Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1354 ATGAGAAGCTCCTGGTTTAATAAATTGTCCATAATTATTGGCCCTAGACTGCCGTTGAGCTGGTTGATGTTGTGCCTGATCAGTCTGCTTGCACTAATTGCAGTCTTAGGTTCGTCTTCTTCTAATAACATTGATTCAACACCACTCACTCGGGCATCTCTCATCTATTCAAACTACAGAAGGATAAAAGAGCAAGCAGCAGTTGATTATTTGGAGTTAAGATCTGTATCATTGGGTATCACTGGGCAAAAAGAACTTGACCTTTGTGGCAAGGAAAAAGAAAATTCTGTGCCCTGCTACAATGTTTCAGCAAATTTGTTAGCAGGGTTTAAGGAAGGTGAGGAGTTTGATCGGCACTGTGAAGTGTCAAGAGAAGTTGAGAGGTGTTTGGTTCGCCCTCCCAAAGACTATAAGATTCCCTTGAGATGGCCTACTGGTAGGGACGTAATATGGAGTGGAAATGTGAAGCTAACCAAAGATCAATTTCTTTCGTCTGGAAGTATGACCAAAAGGTTGATGCTACTAGAAGAAAATCAAATTGCATTTCACTCAGAGGATGGATTGATCTTTGACGGTGTGAAAGATTACTCTCGTCAGCTTGCAGAGATGATAGGGTTAGGAAGTGACGCTGAATTTCCCCAAGCTGGTGTACGTATTATACTAGACATCAATTGTGGATTTGGTAGTTTTGGAGCTCATCTGGCATCACTAAAATTAACGGCAGTTTGTATTGCGGCATATGAAGCAACTGGCAGCCAGGTTCAATTGGCCCTTGAGAGGGGCCTTCCCGCAATGATTGGCAATTTTATTTCAAGACAGCTTCCTTATCCGTCTTTGTCATATGACATGGTTCACTGTGCTCAGTGTGGCATCATTTGGGAGGAAAAGGACGGAATGTTCCTGTTTGAAGTTGATCGTGTTCTTAAACCTGGGGGATACTTTGTCCTAACCTTACCCTCAAGTAGGCCACGGGGAAGTTCATCACGGGTGAAGAAAAACACCATCTTGACCCCAGTGGAAGAGCTAACCCTAAAACTCTGTTGGACCCTTCTAGCTCAGCAAGATGAGACTTTCATTTGGCAGAAAACTGCAGATATTGATTGTTACTCATCTCGCGGGCAGCATGCTATACCTCTATGTAAAGGGCATGATGATAGTCAATCATATTATCAGCCTCTTGTACCATGTATAAGTGGGACATCTAGCAAGCGCTGGATTCCCATACAGAACAGATCCACTGAATCTGAACTAAGCCCTGCTGAGCTTAAAATTCATGGAGTTCAGTCTGAAGACTTCTATGAAGATTTACAATACTGGGGATCAGCTCTTAAGAATTACTGGTCTTTGCTTACCCCATTAATTTTTTCAGACCATCCAAAGAGACCTGGAGATGAAGACCCATTGCCTCCTTTTAACATGATACGCAATGTGATGGACATGAATGCCAAGTATGGTGGTTTTAATGCGGCCCTTCTGGAGGAAAAAAAATCAGTATGGGTTATGAATGTGGTTCCTGCTAGTGCTTCAAATGTACTTCCTCTTATTCTAGATAGAGGTTTTGCTGGCGTTATTCATGATTGGTGCGAACCCTTTCCCACCTACCCCCGGACATATGACTTGCTTCATGCTAATGGACTTCTTTCGCATCTTGCTTCAGAGAGGTGTAGCATGGTTGACTTATTCTTGGAGATGGATAGAATACTTCGTCCAGAGGGATGGGCAATTCTTTCCGATAAAATGGGAGCTATAGAGATGGCCCGAAGATTTGCAGCACAAGTACGTTGGGAAGCAAGGGTGATTGACCTTCAAAATGGCAGCGATCAGCGGCTACTTGTTTGCCAGAAACCATTTGTGAAAAAATAA 1863 0.4305 MRSSWFNKLSIIIGPRLPLSWLMLCLISLLALIAVLGSSSSNNIDSTPLTRASLIYSNYRRIKEQAAVDYLELRSVSLGITGQKELDLCGKEKENSVPCYNVSANLLAGFKEGEEFDRHCEVSREVERCLVRPPKDYKIPLRWPTGRDVIWSGNVKLTKDQFLSSGSMTKRLMLLEENQIAFHSEDGLIFDGVKDYSRQLAEMIGLGSDAEFPQAGVRIILDINCGFGSFGAHLASLKLTAVCIAAYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSYDMVHCAQCGIIWEEKDGMFLFEVDRVLKPGGYFVLTLPSSRPRGSSSRVKKNTILTPVEELTLKLCWTLLAQQDETFIWQKTADIDCYSSRGQHAIPLCKGHDDSQSYYQPLVPCISGTSSKRWIPIQNRSTESELSPAELKIHGVQSEDFYEDLQYWGSALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNAKYGGFNAALLEEKKSVWVMNVVPASASNVLPLILDRGFAGVIHDWCEPFPTYPRTYDLLHANGLLSHLASERCSMVDLFLEMDRILRPEGWAILSDKMGAIEMARRFAAQVRWEARVIDLQNGSDQRLLVCQKPFVKK 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1354 620 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 321 IPR029063 -
Prci5g1354 620 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 470 605 IPR029063 -
Prci5g1354 620 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 72 618 IPR004159 GO:0008168
Prci5g1354 620 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 97 615 IPR004159 GO:0008168
Prci5g1354 620 FunFam probable pectin methyltransferase QUA2 178 363 - -
Prci5g1354 620 CDD AdoMet_MTases 220 318 - -
Prci5g1354 620 Gene3D Vaccinia Virus protein VP39 186 351 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1354 Prci-Chr5 32778611 32785139 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1354 K23870 - qsa:O6P43_032921 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1354 5 32778611 32785139 Prci5g1354 5 32778611 32785139 ECH