Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1238 ATGGCGGCAAGCGCATTCTACCGTTTTCCTTCAACCATCGCTTCTTTCTCCTGCTCCACGGACAGAAAATCGCCACTTTCTCACTCGCACCACTGCAAGATCTTCAAGCCAGTTTCAATTTCTGGGCTAAAATCTCCTTCCGTCAGAGTTTGCAACAACAGGTTGAAATTTTCGAGTTCAACAAGGGTGGTCTCCCGTCAGGTTTTTAAGGTCCGTGGATTGGTGGATGGTGATTCTGCGGCAGGCCCGGAACCAGAATCAGATATTTCTGAAGTGGGTGCTACTATTGACTTAAAGCTGCCAAGAAGAAGCATGCTTGTAGAATTTACTTGCAACTTGTGTGGTGAAAGAACAAGGAGACTTGTAAACCGATTAGCCTATGAAAGGGGTGTCATTTTTGTTCAGTCCCTTTGTTCGAATTGGCTCTTCTTCTTTGTCTCTGGAAAACTGCACGTTTTTGAGGAAAAAGAAAACAAAGAGACCCGGAGAGAGAAATAG 498 0.4498 MAASAFYRFPSTIASFSCSTDRKSPLSHSHHCKIFKPVSISGLKSPSVRVCNNRLKFSSSTRVVSRQVFKVRGLVDGDSAAGPEPESDISEVGATIDLKLPRRSMLVEFTCNLCGERTRRLVNRLAYERGVIFVQSLCSNWLFFFVSGKLHVFEEKENKETRREK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1238 165 PANTHER UNCHARACTERIZED 15 139 IPR024158 -
Prci5g1238 165 Pfam DNL zinc finger 107 155 IPR007853 GO:0008270
Prci5g1238 165 ProSiteProfiles Zinc finger DNL-type profile. 100 165 IPR007853 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1238 Prci-Chr5 31550981 31554481 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1238 K17808 - qsa:O6P43_025648 125.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1238 5 31550981 31554481 Prci5g1238 5 31550981 31554481 ECH