Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0562 ATGGCTTCCAAAACTTCTTCTTTTGCTCTTTTCCTTGTTCTCAACCTCCTCTTCTTCTCATTTGTCACTGCATGTGGCTCATGCGGGGGTTACCCAAACCCGAGACCCAACCCTAACCCGAGGCCACGACCCAACCCTAACCCGAACCCTAGCCCGTTCGGCGGCAGTGGGACATGCCCTCGTGATGCCCTAAAACTAGGGGTGTGTGCTAATGTGTTGAACGGTTTGCTTAATGTAACCCTTGGAAAGCCACCAGTGACCCCTTGCTGCTCTTTGATTCAAGGTCTTGCTGACCTGGAAGCTGCCGTTTGCCTCTGTACTGCCCTTAAAGCTAACATTTTGGGCATCAACCTCAACATTCCTATCTCACTTAGCTTGCTTCTCAATGTTTGCTCTCGCAACGTTCCTCGTGGTTTCAAATGTGCCTGA 429 0.5058 MASKTSSFALFLVLNLLFFSFVTACGSCGGYPNPRPNPNPRPRPNPNPNPSPFGGSGTCPRDALKLGVCANVLNGLLNVTLGKPPVTPCCSLIQGLADLEAAVCLCTALKANILGINLNIPISLSLLLNVCSRNVPRGFKCA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0562 142 MobiDBLite consensus disorder prediction 34 57 - -
Prci5g0562 142 Gene3D - 58 142 IPR036312 -
Prci5g0562 142 SMART aai_6 59 141 IPR016140 -
Prci5g0562 142 FunFam pEARLI1-like lipid transfer protein 1 57 142 - -
Prci5g0562 142 CDD HPS_like 57 141 IPR027923 -
Prci5g0562 142 Pfam Hydrophobic seed protein 58 142 IPR027923 -
Prci5g0562 142 PANTHER - 5 141 - -
Prci5g0562 142 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 61 141 IPR036312 -
Prci5g0562 142 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Prci5g0562 142 MobiDBLite consensus disorder prediction 34 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0562 Prci-Chr5 7176930 7177715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0562 49 141 Acyl Lipid Metabolism Gene Families AT4G22490 38.710 1.66e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0562 - - tcc:18606293 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0562 5 7176930 7177715 Prci5g0562 5 7176930 7177715 ECH