Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0561 ATGTCTTCAAAAGCAACAGTAATGTTGTTCATCTTCATGATTTTAACATTGAGTGCTCTTCCACCACCTACACATGCTTGTGGTGGTGATCCTTGTCACCGACCGGTTCACCCAAAGACCCCACGTCATAAACCCCCGCATCACGGCGGGCACCCGAAATTGTCGCCTCCACAGCCGCCTGTAATTGTCCCGCCGATCATTGTCACGCCGCCACCGATATCCCCACCGGTTATAGTCTACCCCCCGCCAACTGCACCTTCCCCACCGTACTGGGGTGTTCCTCCTCCACAAGTGAGGTGTCCCATTGATGCCTTAAAACTAGGGCTGTGTTTGGATGTGCTTCAAGGGCTTGTGCATGTGGGAATAGGGAACCCAATTGAGAATATATGCTGTCCAGTGATCCAAGGATTGCTTGAACTTGAAGCAGCCATATGTCTTTGCACTGTTATCAGACTTAAGCTTCTGAATCTCAACATATACCTTCCGCTTGCTCTTCAGGTCCTTGCAACTTGTGGCTTGACTCCTCCTCCTGGTTTTGTTTGTCCACCATTATTATAA 558 0.4946 MSSKATVMLFIFMILTLSALPPPTHACGGDPCHRPVHPKTPRHKPPHHGGHPKLSPPQPPVIVPPIIVTPPPISPPVIVYPPPTAPSPPYWGVPPPQVRCPIDALKLGLCLDVLQGLVHVGIGNPIENICCPVIQGLLELEAAICLCTVIRLKLLNLNIYLPLALQVLATCGLTPPPGFVCPPLL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0561 185 Pfam Hydrophobic seed protein 99 182 IPR027923 -
Prci5g0561 185 Gene3D - 95 183 IPR036312 -
Prci5g0561 185 PANTHER - 7 181 - -
Prci5g0561 185 CDD HPS_like 99 181 IPR027923 -
Prci5g0561 185 SMART aai_6 100 181 IPR016140 -
Prci5g0561 185 MobiDBLite consensus disorder prediction 30 55 - -
Prci5g0561 185 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 102 183 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0561 Prci-Chr5 7172873 7173956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0561 100 183 Acyl Lipid Metabolism Gene Families AT4G22490 35.714 1.88e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0561 - - aprc:113851153 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0561 5 7172873 7173956 Prci5g0561 5 7172873 7173956 ECH