Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0434 ATGGCCTTAACACTACGTTCTTCAAATTCCTCCTTTTCCCAAATAGAAGCCAAACTTCCCAAACCCTCGGACGATTGCTTCTCCTCCACAGTCTGCTTTCCTAGAATCAAACCATCATCATCATTCCCTCTTAGAGCAATAAAGAGCAGGATGCTGCAACAAGAACCACATGTCATGGTCGCCACCGCCGGCGGCAGCACGGAGGAGCTGCTGCATCCGCCATTGGTGGCTCCTCATAAGCACGACGATTCAATGAGAGTACCAGTGTTTGTGATGCTGCCATTAGACACGGTGACGATGGGAGGGACTCTGAACAAAGCAAGAGCCATGAATGCGAGTCTGATGGCTCTGAAGAATGCAGGAGTAGAAGGAGTCATGGTGGACGCTTGGTGGGGTCTGGTAGAAAAAGATGGTCCTCTCAACTATAACTGGGAAGCCTACGCTGAACTTGTTCACATGGTTCAAAAGCATGGCTTAAAGCTTCAAGTCGTCATGTCCTTCCATCAGTGTGGAGGAAATGTCGGCGACTCCTGCAGTATTCCTCTGCCTCCATGGGTGCTTGAAGAAATAAGCAAGAACCCTGACCTGGTTTATACAGACAGATCTGGGAGGAGAAATCCTGAGTATATATCTTTGGGGTGTGATTTGATTCCTGTTCTGAGAGGAAGGACGCCTCTTCAGGTGTACTCTGACTTTATGACTAGTTTTCGTGACAGGTTCAGAGATTACCTGGGCAATGTTATCCAAGAAATTCAAGTGGGAATGGGCCCTTGTGGAGAACTCAGATATCCATCTTATCCAGAAGCCAATGGAACTTGGAGGTTTCCTGGGATTGGTGAATTTCAGTGCTACGACAAGTATATGAGGGCTTCGTTGGAGGCAGCGGCAGAGTCGATAGGGAACAAGGATTGGGGAAGAAGTGGGCCACATGATTCCGGCCAATACAATCAATTTCCGGAAGATACTGGATTCTTCAGACGAGAAGGAACGTGGAACTCCGATTATGGAAGCTTCTTCCTCACCTGGTACTCCAACAAACTGATCGAGCACGGCGACAGGATCCTCGAATCCGCCGCCCGGATATTCAATTCCACCGGAGCAAAACTCTCCGGCAAAATCGCCGGCATCCATTGGCATTATACGACGAGATCGCACGCCGCCGAGCTAACCGCCGGCTACTACAACACCCGATTCCGCGACGGCTACCTCCCGATCGCACAGATGCTAGCGAAACACGGAGCCATCTTCAACTTCACGTGCATGGAGATGAAGGATTCGCAGCAACCTCATCACGCGAATTGCTCGCCAGAGGGACTGGTGCGTCAGGTGAAGATGGCGACTAGGACGGCGAGAGTACAGCTCGCCGGGGAAAACGCGTTGGAGAGATACGATCGGGATGGGTACGGACAGGTGATGGAGACAAGTAGATTGGATTGCGGCAACGGGTTGGTGTCGTTCACGTATCTGAGGATGAACAAGAGGTTGTTCGAAGAGGAGAATTGGAGGCATTTCGTGGAATTTGTGAGGAGCATGTCGGAAGGTGGTCGGAGACAGAGACTTCCAGATTATGATTCGCGCGGGACTGATCTTTACCTTGGACACATGGAAGGGATTCACAATAAGAAGAACAAGAAGCATGTTCAAGAAGTAGCTATGGTGTGA 1662 0.5018 MALTLRSSNSSFSQIEAKLPKPSDDCFSSTVCFPRIKPSSSFPLRAIKSRMLQQEPHVMVATAGGSTEELLHPPLVAPHKHDDSMRVPVFVMLPLDTVTMGGTLNKARAMNASLMALKNAGVEGVMVDAWWGLVEKDGPLNYNWEAYAELVHMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDLIPVLRGRTPLQVYSDFMTSFRDRFRDYLGNVIQEIQVGMGPCGELRYPSYPEANGTWRFPGIGEFQCYDKYMRASLEAAAESIGNKDWGRSGPHDSGQYNQFPEDTGFFRREGTWNSDYGSFFLTWYSNKLIEHGDRILESAARIFNSTGAKLSGKIAGIHWHYTTRSHAAELTAGYYNTRFRDGYLPIAQMLAKHGAIFNFTCMEMKDSQQPHHANCSPEGLVRQVKMATRTARVQLAGENALERYDRDGYGQVMETSRLDCGNGLVSFTYLRMNKRLFEEENWRHFVEFVRSMSEGGRRQRLPDYDSRGTDLYLGHMEGIHNKKNKKHVQEVAMV 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0434 553 MobiDBLite consensus disorder prediction 1 17 - -
Prci5g0434 553 Pfam Glycosyl hydrolase family 14 90 507 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 121 135 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 331 350 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 142 160 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 164 185 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 367 383 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 384 395 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 402 425 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 439 461 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 256 278 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Plant beta-amylase signature 246 255 IPR001371 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Plant beta-amylase signature 405 415 IPR001371 GO:0000272|GO:0016161
Prci5g0434 553 PRINTS Plant beta-amylase signature 487 501 IPR001371 GO:0000272|GO:0016161
Prci5g0434 553 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 64 516 IPR001554 GO:0000272|GO:0016161
Prci5g0434 553 ProSitePatterns Beta-amylase active site 1. 168 176 IPR018238 GO:0000272|GO:0016161
Prci5g0434 553 Gene3D Glycosidases 80 548 - -
Prci5g0434 553 MobiDBLite consensus disorder prediction 1 24 - -
Prci5g0434 553 SUPERFAMILY (Trans)glycosidases 86 514 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0434 Prci-Chr5 5715843 5718248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0434 1 553 Glycoside Hydrolase AT4G17090 68.525 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0434 K01177 - gmx:547683 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0434 5 5715843 5718248 Prci5g0434 5 5715843 5718248 ECH