Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0236 ATGGATGCGGGAGCAGCCGGCGTCGGCGATGCCGTCGACGATCTTCCTACGATGGCTGCCGTATCGCGGTGGAAATTCGCCGTGTCCCGGCAGTATCAGCATCTGCTCGACAAGGCGACTCCGCACGTCCTCCACCGTTGGATCGCCTGCTTAGTCGTTGTCTTCGTCTACGTTGTCCGCGTCTACATCATCCAGGGGTTCTACATCGTCTCCTATGGTCTAGGCATTTACATCCTCAACCTTCTCATCGGATTTCTTTCCCCACAGGTTGACCCCGAGATCCAGGAAATCTCTGATGGTCCATCCCTTCCAACGAGGGGGTCCGATGAATTCCGTCCTTTCGTTCGTCGGCTCCCGGAGTTTAAGTTCTGGTACTCGATCACGAAGGCATTTTGCATTGCGTTTGTGATGACCTTTTTTAGTGTTTTTGATGTACCTGTGTTTTGGCCAATTCTTCTCTTCTACTGGGTAGTCCTATTCTCCCTTACCATGAGGAGACAGATATCTCACATGATCAAATACAGATATGTGCCGTTCACATTTGGGAAACAGCGCTATGATGGAAAGAGAACAACGGCAGAGAGCTCAACCCTTTCTCCTAGGGACTGA 609 0.5123 MDAGAAGVGDAVDDLPTMAAVSRWKFAVSRQYQHLLDKATPHVLHRWIACLVVVFVYVVRVYIIQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQEISDGPSLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYRYVPFTFGKQRYDGKRTTAESSTLSPRD 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0236 202 PIRSF AtER_Rer1p 10 197 IPR004932 GO:0016020
Prci5g0236 202 Pfam Rer1 family 26 186 IPR004932 GO:0016020
Prci5g0236 202 PANTHER PROTEIN RER1 17 192 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0236 Prci-Chr5 3268245 3270232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0236 30 196 Miscellaneous Gene Families AT4G39220 74.251 5.89e-95 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0236 - - qsa:O6P43_033854 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0236 5 3268245 3270232 Prci5g0236 5 3268245 3270232 ECH