Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0134 ATGGCGTCCGCCAAGTGGTTCTCCAACACAAGTCTCCGCCTCAGTCTCGGTCGCTCCAAGTCAAAGCCGGCCAGATCAAGATCATCCAACTCCTTAACCTCTCCCACGTCATCATCATCTTCTACCCCAAAGCCCGTCACCAGAGAGGATGAACTGAGGGAGGTGTTCCGGCGTTTTGACGGTAACGGAGACGGCAAAATATCGGCCCTTGAACTCAGGTCGTATTTCGGGTCCATTGGGGAGTACTTGTCCCACGAAGAGGCCGAAGGGGTGATCCGCGACCTTGATTCAGACGGGGACAGTCTTCTGGACATGGAAGATTTCATGAAGCTGATGAAGAAGGAAGAAGGCGATGAGGATCTGAAGAAGGCGTTCGAGATGTTTGAGTGGGAAAAGGGGTCGGGATGCATAACCCCGAAAAGCTTGCAGAGGATGCTGCATCGTCTGGGAGACGACAAATCGTACGACGAGTGCGAGGCAATGATACACGCCTTCGACGTGGATCGCAACGGAGTCCTGGATTTCATTCAGAATGTGAAGGCGGAAAAAACAAAAAAAAAAGAGTCCCTTCTAAAGGCAAACACTGTGTAG 591 0.5178 MASAKWFSNTSLRLSLGRSKSKPARSRSSNSLTSPTSSSSSTPKPVTREDELREVFRRFDGNGDGKISALELRSYFGSIGEYLSHEEAEGVIRDLDSDGDSLLDMEDFMKLMKKEEGDEDLKKAFEMFEWEKGSGCITPKSLQRMLHRLGDDKSYDECEAMIHAFDVDRNGVLDFIQNVKAEKTKKKESLLKANTV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0134 196 MobiDBLite consensus disorder prediction 15 45 - -
Prci5g0134 196 SUPERFAMILY EF-hand 41 175 IPR011992 -
Prci5g0134 196 Pfam EF-hand domain pair 134 175 IPR002048 GO:0005509
Prci5g0134 196 Gene3D - 24 115 - -
Prci5g0134 196 CDD EFh 120 175 IPR002048 GO:0005509
Prci5g0134 196 ProSitePatterns EF-hand calcium-binding domain. 60 72 IPR018247 -
Prci5g0134 196 Gene3D - 116 195 - -
Prci5g0134 196 MobiDBLite consensus disorder prediction 15 49 - -
Prci5g0134 196 CDD EFh 51 113 IPR002048 GO:0005509
Prci5g0134 196 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Prci5g0134 196 ProSiteProfiles EF-hand calcium-binding domain profile. 47 82 IPR002048 GO:0005509
Prci5g0134 196 FunFam Calmodulin A 36 115 - -
Prci5g0134 196 Pfam EF-hand domain pair 50 113 IPR002048 GO:0005509
Prci5g0134 196 PANTHER CALCIUM BINDING PROTEIN 47 112 - -
Prci5g0134 196 SMART efh_1 157 185 IPR002048 GO:0005509
Prci5g0134 196 SMART efh_1 87 115 IPR002048 GO:0005509
Prci5g0134 196 SMART efh_1 120 149 IPR002048 GO:0005509
Prci5g0134 196 SMART efh_1 51 79 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0134 Prci-Chr5 2110030 2113958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0134 3 175 EF-hand Containing Proteins AT3G50770 50.811 3.42e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0134 K13448 - qsu:112032923 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0134 5 2110030 2113958 Prci5g0134 5 2110030 2113958 ECH