Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0129 ATGAGTTCAGTGAATCTTGGCGCGTGGGCTCGCCCCAGTTCGATGTTCACCCAAGTGAGCAGATCCAGATCCCCAACTTTTCATCTCTTCCATGGTCTCAGAAAATTACCCATTTTCTCCCTCCCTCCTAAGCCACCAAGCCATGGAGTCTCTCCCTCTTTCTCCTCTCTTTCAGTCGCTGCGGTTCTCACCAAGGAAAACGCCGTCAAGGATTCTGAGGAGGAGAAACCCGGTTTTAATTTCAACGCCTACATGCTTGACAAGGCTAATAAAGTGAACCAAGCCTTGGATGCTGCTGTTGCCATGCGCGAACCCGAGAAGATTCACGAGGCCATGAGGTACTCGCTTCTCGCCGGCGGCAAGCGCGTGCGCCCAATGCTCTGTATCGCCGCATGCGAACTTGTCGGCGGCCACGAATCAACGGCCATGCCCTCGGCTTGCGCCGTCGAGATGATTCATACTATGTCGCTAATTCACGACGATTTGCCCTGTATGGATAACGATGATCTGCGGCGAGGAAAACCGACAAATCACAAGGTCTTCGGGGAGGACGTCGCGGTTTTGGCCGGCGATGCTCTTCTGTCTTTCGCGTTTGAGCACGTGGCCGTTGCAACCGTGGGCGTTGCGCCGGCTCGGGTAGTTCGGGCGGTTGGGGAGTTAGCCAAGTCGATTGGCGCCGAAGGACTGGTCGCTGGGCAAGTTGTGGATATAGCTTCGGAGGGATTATCCGATGTGGGCTTGGAGAAGCTAGAATTCATTCATATTCACAAAACGGCGGCGTTGCTGGAAGCCGCGGTTGTGCTGGGAGCCGTCGTGGGAGGTGGGTCGGAGGAAGAGATTGAGAAGTTGAGGAAGTTCGCGAGGTACATTGGATTGCTGTTTCAGGTTGTCGATGACATTCTCGACGTTACGAAATCATCGGAGGAATTGGGCAAAACAGCAGGAAAAGACTTGGTGGCTGATAAGGTCACTTATCCTAAGCTCCTTGGGATCGAGAAATCGAGGGAGTTCGCTGAGAAATTGATCAAAGATGCGCAGGATCAGCTCTCTGGGTTTGATCCGGAGAAGGCCGCCCCATTGATTGCTTTGACCAATTACATTGCTTACCGTCAAAATTAG 1119 0.5317 MSSVNLGAWARPSSMFTQVSRSRSPTFHLFHGLRKLPIFSLPPKPPSHGVSPSFSSLSVAAVLTKENAVKDSEEEKPGFNFNAYMLDKANKVNQALDAAVAMREPEKIHEAMRYSLLAGGKRVRPMLCIAACELVGGHESTAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHVAVATVGVAPARVVRAVGELAKSIGAEGLVAGQVVDIASEGLSDVGLEKLEFIHIHKTAALLEAAVVLGAVVGGGSEEEIEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLIKDAQDQLSGFDPEKAAPLIALTNYIAYRQN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0129 372 Coils Coil 328 348 - -
Prci5g0129 372 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 48 372 - -
Prci5g0129 372 SFLD Polyprenyl Transferase Like 83 370 - -
Prci5g0129 372 FunFam Geranylgeranyl diphosphate synthase 78 372 - -
Prci5g0129 372 ProSitePatterns Polyprenyl synthases signature 1. 157 173 IPR033749 -
Prci5g0129 372 ProSitePatterns Polyprenyl synthases signature 2. 290 302 IPR033749 -
Prci5g0129 372 CDD Trans_IPPS_HT 104 370 IPR000092 GO:0008299
Prci5g0129 372 Pfam Polyprenyl synthetase 106 343 IPR000092 GO:0008299
Prci5g0129 372 Gene3D Farnesyl Diphosphate Synthase 73 372 IPR008949 -
Prci5g0129 372 SFLD Isoprenoid Synthase Type I 83 370 - -
Prci5g0129 372 SUPERFAMILY Terpenoid synthases 82 354 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0129 Prci-Chr5 2025240 2026668 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0129 K13789 - qsa:O6P43_024725 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0129 5 2025240 2026668 Prci5g0129 5 2025240 2026668 ECH