Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0127 ATGATTAAACTATTCAAAGTAAAGGAAAAACAGAGAGAACTTGCTGAGAATGCAAGTGGTGGAGCACCCATTAAGAAGCAAACTGCTGGGGAGTTGCGTCTGCACAAAGATATAAGTGAGCTGAATCTACCAAAATCTTGTGTCATCCAATTCCCCAACGGTAAAGATGACCTGATGAACTTTGAAGTTTCAATTCGGCCTGATGAAGGATATTATGTGGGTGGTACATTTTTGTTTTCCTTTCAAGTATCTCCCATCTATCCGCATGAGGCACCAAAAGTCAAGTGCAAGACAAAGGTTTACCATCCAAATATTGACTTGGAAGGAAATGTTTGCCTCAACATCTTGCGAGAAGATTGGAAACCTGTTCTGAATATAAATACAGTCATTTATGGATTGTATCATCTTTTCACGGAGCCAAATTATGAGGACCCTCTCAATCATGACGCGGCGGCAGTTTTGAGGGAGAATCCCAAGATGTTTGAGTCCAATGTAAGGAGGGCTATGGCTGGTGGGTACGTGGGGCAAATCTTTTTCCCTCGCTGTATGTAA 552 0.4185 MIKLFKVKEKQRELAENASGGAPIKKQTAGELRLHKDISELNLPKSCVIQFPNGKDDLMNFEVSIRPDEGYYVGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKMFESNVRRAMAGGYVGQIFFPRCM 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0127 183 Gene3D Ubiquitin Conjugating Enzyme 25 183 IPR016135 -
Prci5g0127 183 CDD UBCc 33 167 IPR000608 -
Prci5g0127 183 SUPERFAMILY UBC-like 24 181 IPR016135 -
Prci5g0127 183 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 29 174 IPR000608 -
Prci5g0127 183 Pfam Ubiquitin-conjugating enzyme 33 168 IPR000608 -
Prci5g0127 183 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 57 161 - -
Prci5g0127 183 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 101 116 IPR023313 -
Prci5g0127 183 FunFam NEDD8-conjugating enzyme Ubc12 25 183 - -
Prci5g0127 183 SMART ubc_7 32 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0127 Prci-Chr5 1967841 1970937 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0127 K10579 - gmx:100813186 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0127 5 1967841 1970937 Prci5g0127 5 1967841 1970937 ECH