Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0110 ATGTTCCGTCTCAGAAGGCAAACCCAGAATCAGGCGGAGCGTGATCCATCATACAAAGATGGAAAGGTGGCTGAACTGAGGGCTGCTCTGGGGCCGTTATCTGGGCGAAGTCTAAAGTATTGTACGGACGCATGTCTGAGGAGATATTTGGAAGCAAGGAATTGGAGCGTCGACAAAGCCAAGAAAATGCTGGAAGAAACAGTCCAATGGAGATCCACTTATAAGCCTGAGGAAATCCGTTGGCCTGAAGTGGCACATGAGGGTGAGACAGGAAAAGTGTCGAGAGCAAATTTCCATGATCGTTTCGGAAGAACTGTGCTTATAATGAGACCAGGAATGCAGAACACGGCATGTCCAGAAGATAATATCAGGCATTTAGTGTACCTCATGGAAAATGCTATCATCAATCTTCCCGAAGGTCAAGAGCAGATGTCATGGCTGATAGACTTCACTGGATTTTCACTCAACACCACTGTTTCTGTCAAAACAGCTCGTGACATTATTTACATCTTGCAAAACCACTATCCTGAAAGGCTTGGTATTGCTTTTCTGTATAGCCCACCAAGAATATTTCAGGCTTTCTGGAAGGCTGTGAGATACTTCTTGGATCCCAGGACATTCCTGAAGGTGAAGTTCGTTTATCCTAAAGAGAAGGAGAGTGAAGAGCTGATGAAATCACTGTTTGACATGGAAAATCTTCCCAATGAATTTGGAGGAAAAGCAACATTGAAGTATGACCATGAAGAATTTTCCAGGATGATGATAGATGATGATGTGAAAACTGCTAAATTCTGGGGAGTCGATGACAAACCATTCGACACAAAAGAATGA 831 0.4356 MFRLRRQTQNQAERDPSYKDGKVAELRAALGPLSGRSLKYCTDACLRRYLEARNWSVDKAKKMLEETVQWRSTYKPEEIRWPEVAHEGETGKVSRANFHDRFGRTVLIMRPGMQNTACPEDNIRHLVYLMENAIINLPEGQEQMSWLIDFTGFSLNTTVSVKTARDIIYILQNHYPERLGIAFLYSPPRIFQAFWKAVRYFLDPRTFLKVKFVYPKEKESEELMKSLFDMENLPNEFGGKATLKYDHEEFSRMMIDDDVKTAKFWGVDDKPFDTKE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0110 276 Gene3D - 3 267 IPR036865 -
Prci5g0110 276 PANTHER GH16843P 9 270 - -
Prci5g0110 276 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Prci5g0110 276 FunFam Phosphatidylinositol transfer protein 3 2 274 - -
Prci5g0110 276 CDD SEC14 99 240 IPR001251 -
Prci5g0110 276 Pfam CRAL/TRIO domain 98 239 IPR001251 -
Prci5g0110 276 SMART sec14_4 87 242 IPR001251 -
Prci5g0110 276 SUPERFAMILY CRAL/TRIO N-terminal domain 16 82 IPR036273 -
Prci5g0110 276 SUPERFAMILY CRAL/TRIO domain 81 260 IPR036865 -
Prci5g0110 276 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Prci5g0110 276 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0110 Prci-Chr5 1716547 1719772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0110 46 235 Acyl Lipid Metabolism Gene Families AT1G55840 25.238 1.06e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0110 K26544 - qsa:O6P43_033714 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0110 5 1716547 1719772 Prci5g0110 5 1716547 1719772 ECH