Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0056 ATGGCGGCTGGTGATGAGAAACATTCTGGAAAATGGCGTTATACTTGGGAAGCACAGTCCCACGTCCCTACTCTTCGTCTCTTGCTTTTCGCTAAAAACGCTAATCCTTCTTTGCAATGCCTCAATCTAAAAGTTCTACTTCTTCCTTCTCAGTCTCTGGTGGCTGTGAGCTGGCTTGAGCCCACCCTAGTCTCGCTCAGGGTTCCGATTCCTAGGGTTTTGGTCGACTTTGAATCACCTCCCAGTTCTCGAGCTTTGGACGATCACATTGAAGTGAAGCTCCTACTCGTTCTGCCGGTCGATCATCCCATTGTCTCTAGCTTCGATTCTGTGATGAATCTGTCTGATGACCCAGTAAATGTATTACCTGACGTATCAAAGCCTCTAATAATGGAATCTGATGTAAAAAATTTATCTTCCAGAGCATCAGTTCATTTTTATTGCAGAAGTTGCTCCTTCAAATTGACTAGAAATCCTCTCAGGAGTTTGGTTGAAATGCCATCAGTCAATTGGCGAGAGGTGGCTGACAACTGGTTTGGGGCTTGTTGTTGTTCATTTGGAGGCATAAGTGAGAAGCTGGTGATCAAATATGCAAATTCTTATACTTGCGCACCAGGGGTATGCCTATTAAGCTCTACATCTATTACTATTTGCAAGGATGATCTTATTGAGTATAACTTCCTTGAAAGTGGTGGAGAAGAAGAGTGTAATCCTAAATCTGATAATTTTGAAGAAGGAATTAACAAAGCTTCTATAAAATCTGAGATGTCTATGGAAAGGTCTTCAACTTGCAGTGAGATTGGTAAAACCATATATAATTCTGACGGAAGTTCAAGGTTTGCAGATTCTGAGAATGAAAACCTTCATATGAACTTGGGACTTGAAGCTGGTAAAGTAATATCTAATCATGATGACTTCTCTCGTTCGTACCCAGATTCAAATGTCCCTGCAGATGTGGCTATGGCTCCTAGTCGTTCTGCTCTGATGGCAAGCAGCGTTCCCCATCTTGAGAATGAGGATTGGAAACATCAATGCTGTGAAAATGCTAGAAAAGAACATAGAGATACAGCAGCCATGGAAATTCTTGCAAGTCAGAAGTCATTCCTCAATGGGTTTCTTGAAGATGTTTTCATGGCTAGATCATCCAATCTTGTGAGAAGGGTATGCCTATTAAGCTCTACATCTATTACTATTTGCAAGGATGATCTTATTGAGTATAACTTCCTTGAAAGTGGTGGAGAAGAAGAGTGTAATCCTAAATCTGATAATTTTGAAGAAGGAATTAACAAAGCTTCTCTAAAATCTGAGATGTCTATGGAAAGGTCTTCAACTTGCAGTGAGATTGGTAAAACCATATATAATTCTGACGGAAGTTCAAGGTTTGCAGATTCTGAGAATGAAAACCTTCATATGAACTTGGGACTTGAAGCTGGTAAAGTAATATCTAATCATGATGACTTCTCTCGTTCGTACCCAGATTCAAATGTCCCTGCAGATGTGGCTATGGCTCCTAGTCGTTCTGCTCTGATGGCAAGCAGCGTTCCCCATCTTGAGAATGAGGATTGGAAACATCAATGCTGTGAAAATGCTAGAAAAGAACATAGAGATACAGCAGCCATGGAAATTCTTGCAAGTCAGAAGTCATTCCTCAATGGGTTTCTTGAAGATGTTTTCATGGCTAGATCATCCAATCTTTCAGAAGATATTGATTGGTGTGAATTCATGTGCCCTCAGTGCAAGTCTGTTCTTGGAGCCTATCCAAGTTGTAAGGGCGATGCACCTGTAGATGGAGGAGTACGATTGTTCAAATGTAATATTTCTACTTGTTTGCCAACTAGAGGATCTGGAGACTTGTTCAGGCAATATACAATGGGAAAAATGTTTGCAAATAAGCTAATAGAGTGTGCAAATGATGAATCGTCATTTCGGTTTGTGGTCATGGATCTGAAAGCAAAATCGCCTACCCTGCAAATCATATCGCTTTGCACCGTGAATTTTAGTATCAGTTTCCGTCAGGCTTGGGGGTTTCAATCTGAGTTGCATGTGTTAATTGAAGTGAGGATCCACAGAGAACAGATTTGCCCGTGGCTTTGCGCCGCAGGAGCACCAGCTCTCCTCTTATATAGATTGTATCCCATGCCTATCAAGCATATTGTTAGAGGGTCATTATTCTCTTTTTAA 2181 0.4104 MAAGDEKHSGKWRYTWEAQSHVPTLRLLLFAKNANPSLQCLNLKVLLLPSQSLVAVSWLEPTLVSLRVPIPRVLVDFESPPSSRALDDHIEVKLLLVLPVDHPIVSSFDSVMNLSDDPVNVLPDVSKPLIMESDVKNLSSRASVHFYCRSCSFKLTRNPLRSLVEMPSVNWREVADNWFGACCCSFGGISEKLVIKYANSYTCAPGVCLLSSTSITICKDDLIEYNFLESGGEEECNPKSDNFEEGINKASIKSEMSMERSSTCSEIGKTIYNSDGSSRFADSENENLHMNLGLEAGKVISNHDDFSRSYPDSNVPADVAMAPSRSALMASSVPHLENEDWKHQCCENARKEHRDTAAMEILASQKSFLNGFLEDVFMARSSNLVRRVCLLSSTSITICKDDLIEYNFLESGGEEECNPKSDNFEEGINKASLKSEMSMERSSTCSEIGKTIYNSDGSSRFADSENENLHMNLGLEAGKVISNHDDFSRSYPDSNVPADVAMAPSRSALMASSVPHLENEDWKHQCCENARKEHRDTAAMEILASQKSFLNGFLEDVFMARSSNLSEDIDWCEFMCPQCKSVLGAYPSCKGDAPVDGGVRLFKCNISTCLPTRGSGDLFRQYTMGKMFANKLIECANDESSFRFVVMDLKAKSPTLQIISLCTVNFSISFRQAWGFQSELHVLIEVRIHREQICPWLCAAGAPALLLYRLYPMPIKHIVRGSLFSF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0056 726 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 3 385 IPR019193 -
Prci5g0056 726 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 120 239 IPR019193 -
Prci5g0056 726 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 565 654 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0056 - - pcin:129311442 1474.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0056 5 1336126 1340100 Prci5g0056 5 1336126 1340100 ECH