Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0037 ATGGCTTCTCTCCCTTCTCCACTCTTTTCTCTGATTTTGATTTTTTCAGCTTCTCCCTTGCTCTTTCCTGCACTTTCCACCACTTATTGGGGAGATATCGAGGCCCTCAAGCACCTCAAGAACGGCCTTCACAACGCTTCCGTCCCTCCGGGTTCGTGTCTTGCTTCTTGGGACTTCTCTGTCGACCCTTGCGACAACCTCTTTGGCGAGAAATTCACCTGCGGCTTCCGCTGCGACGTCGTCGTCTCCGGCTCGAGTCGGGTCACCGAAATCGCCCTGGACCACGCTGTTTACGCAGGTTCTCTCGCAACCTCGTCTTGGAACCTTCCTTATTTAGAAACTCTCGATGCATCTGACAACTACTTTTCCGGTCGGATTCCGGAGTCCTTCTCCAGTCTTACTCGTCTTCGCCGGCTCGCCCTGTCCGGGAATTTGTTGGACGGCGAGATTCCCTCTTCCATTGGTTTCCTGTCTAATCTTGAAGAGCTGTACCTCGATAACAATAATCTTCGGGGAACGATCCCTTCTAGCTTGAACGGGCTCAAGAGCTTGAAAAGGCTCGAACTTCAGCTCAACAGTCTCAGCGGCGAGATTCCTGATCTCGGTTCTCTAGAAAAATTTTACTACCTCGACATCAGCGACAATGCCTTCGCCGGTGAAATCCCGGCGACGTTGCCCAAATCCTTGGTTGAGATCTCAATGAGGAACAATAGCTTGACCGGAGGTTTAAGATCAGAGAGCTTCAAAGGGCTGATGGACTTGCAGGTGCTAGATTTGAGTTATAACAGTCTGGAGGGCACTGTGCCCGTAGTTCTGTTTGAGCTGCCTTCGCTGGAGCAGCTGAGTCTTTCGTTCAACAAACTGTCCTCCATGGAGGCGCCATCTTACAATGCTGGATGGCAGAGCGGGCTGATAGCGGTTGATCTGAGCAACAACGAGATTCAGGGGCCATTGCCTTGGTTCATGGGAGTGATGCCGAAGCTATCGTCACTGTCGTTAGAGAACAACAAGTTCACGGGAATGATACCGACCCAGTACGCTCTGAAGACGGTGGTTCCGGGACTGGGAACATCGCCGTTTGGGAGGCTGATGCTAAGAGGGAATTACTTGATCGGGGGCATCCCCAGCCCCTTACTGCTACTCAAACCGGGTTCTGCAAATGTGACGTTGGGGGACAATTGTCTGTTCAGATGCCCCCTCAGGTTCTTTTTCTGCGAGGACCAGAAATCATTAGACGTATGCAACAGATTTAGCCCCTTCATCCCTTAG 1269 0.5169 MASLPSPLFSLILIFSASPLLFPALSTTYWGDIEALKHLKNGLHNASVPPGSCLASWDFSVDPCDNLFGEKFTCGFRCDVVVSGSSRVTEIALDHAVYAGSLATSSWNLPYLETLDASDNYFSGRIPESFSSLTRLRRLALSGNLLDGEIPSSIGFLSNLEELYLDNNNLRGTIPSSLNGLKSLKRLELQLNSLSGEIPDLGSLEKFYYLDISDNAFAGEIPATLPKSLVEISMRNNSLTGGLRSESFKGLMDLQVLDLSYNSLEGTVPVVLFELPSLEQLSLSFNKLSSMEAPSYNAGWQSGLIAVDLSNNEIQGPLPWFMGVMPKLSSLSLENNKFTGMIPTQYALKTVVPGLGTSPFGRLMLRGNYLIGGIPSPLLLLKPGSANVTLGDNCLFRCPLRFFFCEDQKSLDVCNRFSPFIP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0037 422 SMART LRR_typ_2 133 155 IPR003591 -
Prci5g0037 422 SMART LRR_typ_2 157 181 IPR003591 -
Prci5g0037 422 SMART LRR_typ_2 275 298 IPR003591 -
Prci5g0037 422 SMART LRR_typ_2 325 348 IPR003591 -
Prci5g0037 422 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515
Prci5g0037 422 SUPERFAMILY L domain-like 83 349 - -
Prci5g0037 422 Pfam Leucine rich repeat 228 288 IPR001611 GO:0005515
Prci5g0037 422 Pfam Leucine rich repeat 158 216 IPR001611 GO:0005515
Prci5g0037 422 Gene3D Ribonuclease Inhibitor 31 204 IPR032675 -
Prci5g0037 422 Gene3D Ribonuclease Inhibitor 205 422 IPR032675 -
Prci5g0037 422 FunFam Nuclear pore complex protein NUP107 30 200 - -
Prci5g0037 422 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 12 410 - -
Prci5g0037 422 PRINTS Leucine-rich repeat signature 254 267 - -
Prci5g0037 422 PRINTS Leucine-rich repeat signature 275 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0037 Prci-Chr5 1152962 1155022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0037 86 380 Receptor kinase-like Gene Family AT1G08590 29.565 4.45e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0037 - - pop:7495521 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0037 5 1152962 1155022 Prci5g0037 5 1152962 1155022 ECH