Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3168 ATGCGACGACGGGCGGCCGAGTATCGGCGCCCGGTTCGACGGAGGTTTTCATGTTGGATCTGGTTGCTTCTTGGCTTGTTCTGTGTAGCAGGCTTTGTCTTGTTTATTGTACAACACAATCACCATGAAGATCGGGTCGAGCTTGCCTTTCTGGAGAGAGATGAAATAACGGAACCCACTGATAAGGATAGTTTGAATTTTACAGAAGAAATATCAAGTGTAACCTCATTTTCACGGCAGCTAGCAGAACAAATGATTTTGGCCAAGGCTTATGTGATAATTTCCAAAGAGCACAATAACCTTCACCTAGCCTGGGAGCTTAGCTCAAAGATAAGAAGTTGTCAGCTTTTGCTTTCTAAAGCTGCCATGACAGGAAAGCCCATTTCATTTGAGCAAGCAGAGCCAATTATAAAAAGCCTGTCTTCTCTGATTTTCAAGGCACAAGATATTCATTATGATGTTGCAACCACAATAATGACAATGAAGTCGCGTATTCAATTTCTTGAAGACCGAGCACATTCAGCAACAGTCCAAGGCAACTTTTTTAGCCAAGTAGTAGCTGAAGGACTACCCAAGAGCCTTCATTGCCTACACGTCAAACTTATGACAGATTGGGTCAAAATGCCATCCCTACATGAACTTGCAGATCAGAAGAGAAAATCTCCACATCTAACGGACAACAATCTCTATCATTTCTGCATATTTTCAGATAATGTGCTTGCTACTTCTGTAGTTGTGAATTCCACAGTCTTGAATGCTGACCATCCAAAACAGTTGGTCTTTCACATTGTTACTAATGGCGTCAATTATGGAGCAATGCAAGCATGGTTCCTAATTAATGACTTTAGAGGGGCCACCATAGAAGTGCAGAATGTTGAGAATTTTCATTGGTTAAATGAATCTTATTCTCCAGTTGTCAAGCAACTCCTCAATGCAGATTCACGAGCCTTCTATTTTGGAGCATATAAAGATTTAGATGTTGAAGCAAAACTGCATAATCCTAAGTATTTGTCATTACTGAATCATCTTCGGTTCTACATCCCTGAGATATATCCACAGCTTGAGAAGGTTCTATTCCTGGATGATGATGTTGTTGTCCAGCAGGATCTGACCCTTCTTTTCTCATTGGATCTGCATGGGAATGTGAATGGTGCAGTGGAAACTTGTCTTGAAGTATTTCATCGTTTTTACAAGTATCTCAACTTCTCAAATCCGATCATAAGCTCAAAATATGATCCTCAGGCGTGTGGGTGGGCTTTTGGTATGAACGTTTTTGACTTGGTTGCCTGGAGGAAAGCAGACGTGACTGCAAGATATCATTATTGGCAAGAGCAGAATGCTGATGGGTCACTTTGGAATCTGGGCACTCTACCTCCTGGTCTTCTAAGTTTTTATGGTCTGACAGAGATAATTGACAGGAGATGGCATGTTTTAGGATTGGGGAACGACGTAAATATTGATCATCGCCTGATAGAAAGTGCAGCAGTCATTCACTTCAATGGGAACATGAAGCCTTGGCTGAAGTTGGCTGTTAGCAAGTACAAGCTGCTGTGGGATCGGTACATAAATCAAAGTCACCCTTATCTCCAAGATTGTGCCACAGGTTGA 1608 0.4179 MRRRAAEYRRPVRRRFSCWIWLLLGLFCVAGFVLFIVQHNHHEDRVELAFLERDEITEPTDKDSLNFTEEISSVTSFSRQLAEQMILAKAYVIISKEHNNLHLAWELSSKIRSCQLLLSKAAMTGKPISFEQAEPIIKSLSSLIFKAQDIHYDVATTIMTMKSRIQFLEDRAHSATVQGNFFSQVVAEGLPKSLHCLHVKLMTDWVKMPSLHELADQKRKSPHLTDNNLYHFCIFSDNVLATSVVVNSTVLNADHPKQLVFHIVTNGVNYGAMQAWFLINDFRGATIEVQNVENFHWLNESYSPVVKQLLNADSRAFYFGAYKDLDVEAKLHNPKYLSLLNHLRFYIPEIYPQLEKVLFLDDDVVVQQDLTLLFSLDLHGNVNGAVETCLEVFHRFYKYLNFSNPIISSKYDPQACGWAFGMNVFDLVAWRKADVTARYHYWQEQNADGSLWNLGTLPPGLLSFYGLTEIIDRRWHVLGLGNDVNIDHRLIESAAVIHFNGNMKPWLKLAVSKYKLLWDRYINQSHPYLQDCATG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3168 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 532 IPR029044 -
Prci4g3168 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 62 533 IPR029993 GO:0047262
Prci4g3168 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 531 IPR029044 -
Prci4g3168 535 CDD GT8_like_1 230 523 - -
Prci4g3168 535 FunFam Hexosyltransferase 232 528 - -
Prci4g3168 535 Pfam Glycosyl transferase family 8 234 509 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3168 Prci-Chr4 42882822 42888061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3168 1 532 Glycosyltransferase AT2G20810 52.876 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3168 K13648 - gmx:100817381 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3168 4 42882822 42888061 Prci4g3168 4 42882822 42888061 ECH