Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3133 ATGGCCCAGAACCAGAGGCGCACAAGCGTCATCGACTTTCTAGGGGAAGAAATTGTGAGAATCATCGCACCAGTATCAATCTGTATGTTTTTGGTCGTCCTCTTGGTCTCAGTCCTCGATACCAGTTCCAACTCTTTTTCAGCATTAATCTCCAGCGTAGCCACCATTGCATACAATGAGACCAGCTCAGACTCTTTCTGGGACAAATTAGTGGGTGCCCTTTTGAACTCCCTTGCATTTGTAGCCGTTGTCACTGTTGCAACTTTTGTTTTGGTACTTCTCTTCTATCTTAGATGCACCAGATTCTTAAAACTATACATGGGGTTCTCTTCCTTTGTTGTTTTGGGATTCTTGGGCGGTGAAATTGCACTCCTCTTTATTGAAGATTTTAGTATCCCTGTTGATTGCATGACCTTTTTTCTGGCTTTGTTTAATTTTGCTGTCGCTGGTGCATTGGCTGTATTTATGTCCAAAATGGCAATAGTTGTGACTCAAGGATACTTGATTCTTATTGGGATGCTAGTTGCTTACTGGTTCACCATGTTACCTGAATGGACCACCTGGGTGCTTCTCGTTGCCCTGGCACTATATGATCTTGCTGCTGTTCTATTACCGTTTGGGCCACTAAGGCTTTTGGTGGAACTTGCAGTCTCAAGAGATGAAGAAATTCCTGCACTGGTTTATGAGGCCAGGCCAGTGAACTATGATAATGAGGATTCAAGGGGTTATTTAACTCAGAGTCAGAGGAGGGTGCGGAGAGATAGGGGGCTTGAGAACTCCAATCCAAGTGTAAATTCTGTGCTGGATGAAACCCAAAACAATGAATCAAACTTCAATATTGATACAGGGAACGCTATTAACCGAGATTTGATCAGCAATGCTTCAGATGCCATCCATGAAGACGCAAATTTGGTAGGGGAAGATGCTGTTTCAAATTCAAATCCTTCTTCTAGCATCTATAATGGCAGAAATCTGGTGGAAGCTGAAGAGGGACGGGTTTTAGAAACTGAGTCAGGGCTCTCTACACCCCTGATTGATCATGAAATGAATACGCAGCTCCACAGACATGAAGATTCAGTGGCAAGTCAAAGTTTGATGCCAGAGGGAATTGGATTAGGGTCATCTGGAGCAATCAAGCTAGGTTTAGGAGATTTCATTTTCTACAGTGTGTTGGTTGGCAGGGCAGCGATGTATGATTATATGGCAGTGTATTCATGTTATCTTGCTATCATCGCTGGGCTGGGCATCACTTTAATGCTATTAGCATTGTATCAGAAAGCCTTGCCTGCTCTTCCAGTGTCAATAATGCTGGGATTATCCTTTTATTTCTTGACCAGGCAGTCAAGTTATCTGAGCTTTATCTTATTTTTATCAGTAATATTAGCTACTTTGAGCTTCTGCGGTATGCATCTTTGCCCTCCCGATCATTGA 1431 0.4298 MAQNQRRTSVIDFLGEEIVRIIAPVSICMFLVVLLVSVLDTSSNSFSALISSVATIAYNETSSDSFWDKLVGALLNSLAFVAVVTVATFVLVLLFYLRCTRFLKLYMGFSSFVVLGFLGGEIALLFIEDFSIPVDCMTFFLALFNFAVAGALAVFMSKMAIVVTQGYLILIGMLVAYWFTMLPEWTTWVLLVALALYDLAAVLLPFGPLRLLVELAVSRDEEIPALVYEARPVNYDNEDSRGYLTQSQRRVRRDRGLENSNPSVNSVLDETQNNESNFNIDTGNAINRDLISNASDAIHEDANLVGEDAVSNSNPSSSIYNGRNLVEAEEGRVLETESGLSTPLIDHEMNTQLHRHEDSVASQSLMPEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDYMAVYSCYLAIIAGLGITLMLLALYQKALPALPVSIMLGLSFYFLTRQSSYLSFILFLSVILATLSFCGMHLCPPDH 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3133 476 Pfam Presenilin 14 447 IPR001108 GO:0004190|GO:0016020|GO:0016485
Prci4g3133 476 PRINTS Presenilin family signature 22 32 IPR001108 GO:0004190|GO:0016020|GO:0016485
Prci4g3133 476 PRINTS Presenilin family signature 181 188 IPR001108 GO:0004190|GO:0016020|GO:0016485
Prci4g3133 476 PRINTS Presenilin family signature 198 215 IPR001108 GO:0004190|GO:0016020|GO:0016485
Prci4g3133 476 SMART psh_8 71 449 IPR006639 GO:0004190|GO:0016020
Prci4g3133 476 Gene3D Presenilin 359 466 IPR042524 -
Prci4g3133 476 PANTHER PRESENILIN 5 447 IPR001108 GO:0004190|GO:0016020|GO:0016485
Prci4g3133 476 MobiDBLite consensus disorder prediction 246 275 - -
Prci4g3133 476 MobiDBLite consensus disorder prediction 258 275 - -
Prci4g3133 476 FunFam Presenilin 351 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3133 Prci-Chr4 42619513 42621167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3133 1 446 Miscellaneous Gene Families AT2G29900 56.951 3.99e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3133 K04505 - qsa:O6P43_022913 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3133 4 42619513 42621167 Prci4g3133 4 42619513 42621167 ECH