Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3000 ATGTCTAAGGCATCGTTTGTTTCCTGCATTTTCCTGGTCATTCTGCTCTTCTCTCAGGCTCATGCAGAGAAACCCAAGATTGGAACTTATGAGCTCAAGAGAGGAAATTTCCAAGTCAAGTTGACTAACTTTGGTGCCACTATTATGTCTTTCGTTGTACCTGACAAAAATGGAAACTTAGCTGATATTGTCCTTGGCTACGATTCTGTCAAGGATTACAAGCAGAACGATACGACATACTTTGGCGCCCTTGTTGGACGTGTGGCCAATAGAATTGGAGAAGCTAAATTCTCTTTGGATGGAAAAACCTACCATTTGCCTGCTAATGATGGCAATAACACGCTCCACGGCGGACCTAAGGGTTACAGTCAGGTTGTATGGAATGTAGCATCCCACAGAGAAGATGGTCACATCACATTTACTCATGTCAGTCCTGACAACGATCAAGGAAAGCTTGAGGTTTCAGTGACTTATGCTTTCTTCCAAACCAACAAATTCATTGTGATGATGGAAGCCAAGCCCATTGACAAAGCCACACCAGTGAATCTTGCTCAGCACACTTACTGGAATCTGAGGGGCCACAACAGCGGAGACATTCTCTCACATACTATTCAGCTCTTTGGCTCAAAAATCACACCAGTAAACGATCAACTCATCCCCACAGGTCAGTTCATGGAAGTCAAGGGAACCCCATATGATTTCCAAGAACCAAAAGAAATTGGCAGTCAGATTCATGATCTTCCTAGTGGCTATGACATAAACTATGTGTTGGACAAGAATCACTCAAAGCACTTTAATAGAGTGGCTGTGGTGAAGGACTCAGTTTCTGGGAGGAAGATGGAGCTGTGGTCAAACCAACCTGGTGTACAGTTCTATTCCAGCAACATGTTGAAGAATGAGAAGGGTAAGGATGGAGCCATTTACCGTAAGTATGCTGCTATTGCATTGGAGACTCAGGGCTTCCCAGATTCAGTGAACCATCCAGATTTCCCATCACAGATTGTCAAGCCAGGAGAGATATATAAGCACTTCATGGTTTACAGATTCACTGCTGAGTAG 1059 0.4381 MSKASFVSCIFLVILLFSQAHAEKPKIGTYELKRGNFQVKLTNFGATIMSFVVPDKNGNLADIVLGYDSVKDYKQNDTTYFGALVGRVANRIGEAKFSLDGKTYHLPANDGNNTLHGGPKGYSQVVWNVASHREDGHITFTHVSPDNDQGKLEVSVTYAFFQTNKFIVMMEAKPIDKATPVNLAQHTYWNLRGHNSGDILSHTIQLFGSKITPVNDQLIPTGQFMEVKGTPYDFQEPKEIGSQIHDLPSGYDINYVLDKNHSKHFNRVAVVKDSVSGRKMELWSNQPGVQFYSSNMLKNEKGKDGAIYRKYAAIALETQGFPDSVNHPDFPSQIVKPGEIYKHFMVYRFTAE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3000 352 Pfam Aldose 1-epimerase 29 348 IPR008183 GO:0005975|GO:0016853
Prci4g3000 352 SUPERFAMILY Galactose mutarotase-like 21 349 IPR011013 GO:0003824|GO:0005975|GO:0030246
Prci4g3000 352 PANTHER ALDOSE-1-EPIMERASE 23 350 - -
Prci4g3000 352 PIRSF GALM 17 352 IPR015443 GO:0016853|GO:0019318
Prci4g3000 352 CDD galactose_mutarotase_like 30 349 IPR047215 GO:0016853
Prci4g3000 352 Gene3D - 16 351 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3000 Prci-Chr4 41663502 41664994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3000 2 351 Miscellaneous Gene Families AT3G47800 57.790 2.70e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3000 K01785 - qsa:O6P43_022818 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3000 4 41663502 41664994 Prci4g3000 4 41663502 41664994 ECH