Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2954 ATGACGCCAAAGTCAGAGATGAAGAGATGTAGGACAGAAAAATTAGAAACTTTTGTGGCATTGATCAGGCAAAGACCCATTCAGATTCTGATCATATTTGGATTGCTGTATATAATGTTGGTCACGCTGGAAATCCCCCTTGTGTTCAAATCCAGGTTTAGTGTTGTGCCTCATGATTTCTTGACTAACCGTCCAAGGCTGGAGAGCGAGGAGGACTTCGAAAAAATTGAAGCTCCAACCCTCCCTCTTGAAGAAGCTTCTCAAAATGCTGATCAACGCACTCATAGACAACTAAATGAGCACAAAATTATGTCTGGCTTGATCTTCAACAATGATACATTTCATTTGTCGGGTAGGGATGGGTCGTCCGAGCTTTATGAGTCAGCAAAGAATGCTTGGATTCTGGGTAAGAAGATTTGGGAAAAGTTGGAAACGTTGAATTTGAGGACCGTCCCTAAGAAGTCCGAGCATCAATCTGAGTCATGTCCAGCATCGATTTCTCTATCTGGTTCTGAGTTTCTGGCTCAGGGGCTAGTCATGGTCCTTCCTTGTGGACTGACATTGGGGTCCCACATAACAGTGGTAGGGAAGCCGCAGGTTGTCAACCCTGGGGCAGTTCATCGTGTGCCAGCGGCACAGTTCGTGATGGAGTTGCAAGGGTTGAAGATAGTGGATGGCGAGGATCCCCCAAGAATTTTGCATTATAATCCCAGATTGAAGGGGGATTGGAGCAGGAAGCCTGTGATTGAGCAAAACACACGATACAGAATGCATTGGGGATCCGCACAGCGGTGTGACGGCTGGAAATCAAAGGCTGATGAAGAGACAGTTGATGGACTGGTGAAGTGTGAGAAGTGGATTCGGGATGATGACAGTCATGCAGTGGAGTCTAGGGCAACATGGTGGTTGAACAGACTTATAGGTCGAACAAGAGAAGTAACGGTCGAGTGGCCCTTCCCATTTGCTGAAGGCAAGCTTTTTGTTCTTACTCTTAGTGCTGGAATGGAGGGCTTTCATGTTAATGTTGATGGGAGACATGTGACCTCTTTCCCTTATCGTACTGGTTTTACTCTTGAGGATGCCACCGGCTTTTCTTTAGGTGGGGACATTGATGTCCACGCCATATTTGCTACCTCTCTGCCTCAAGTACATCCTAGTTTTGCTCCACAAAAGCATCTGGACTTCTCAAGAAGATGGCGTGCCCCACCGCTCCCTGGCTTTGATGTGGAACTGTTCATCGGAGTCCTTTCTGCCGGAAACCATTTTGCAGAGAGGATGGCTGTAAGGAAGTCATGGATGCAGCACAATCTCATCCAGTCTTCAAGAGTGGTGACTCGATTCTTTGTAGCAGTGCATTCAAGAGAAGAAGTGAATATAGAGTTAAAGAAGGAAGCAGAATTTTTTGGAGATATTGTTATAGTGCCGTACATGGATAATTATGACCTTGTTGTGTTGAAAACGGTGTCCATATGTGAATATGGGCTTCGCACAGTTTCTGCCACGTATATCATGAAGTGTGATGATGACACTTTTGTTAGAGTGGATGCTGTTATAAATGAAGCAAGGAAGGTTCCAGGAGATAAGAGCTTTTACATTGGTAACATGAATCACTTCCACAAACCTTTGCGCCATGGTAAATGGGCCGTGACATACGAGGAGTGGCCAGAAGAGCGATATCCGCCATATGCTAACGGACCAGGTTATATTCTGTCTTCTGACATTGCTCACTACATCGTATCAGAATTTGAGAGCCATAAATTAAGGTTGTTTAAGATGGAGGATGTGAGTATGGGAATGTGGGTAAAGCAATTTAACAGCTCAAAACCAGTCGTCTATGCACATAGCTTAAAGTTCTGCCAGTTTGGCTGCATAGAAGGCTATTACACAGCACATTACCAATCTCCGAGGCAGTTACAGTGTTTGTGGGATAAACTGCAAATGCAAACAAGGCCTCAGTGCTGCAACATGAGATGA 1974 0.4514 MTPKSEMKRCRTEKLETFVALIRQRPIQILIIFGLLYIMLVTLEIPLVFKSRFSVVPHDFLTNRPRLESEEDFEKIEAPTLPLEEASQNADQRTHRQLNEHKIMSGLIFNNDTFHLSGRDGSSELYESAKNAWILGKKIWEKLETLNLRTVPKKSEHQSESCPASISLSGSEFLAQGLVMVLPCGLTLGSHITVVGKPQVVNPGAVHRVPAAQFVMELQGLKIVDGEDPPRILHYNPRLKGDWSRKPVIEQNTRYRMHWGSAQRCDGWKSKADEETVDGLVKCEKWIRDDDSHAVESRATWWLNRLIGRTREVTVEWPFPFAEGKLFVLTLSAGMEGFHVNVDGRHVTSFPYRTGFTLEDATGFSLGGDIDVHAIFATSLPQVHPSFAPQKHLDFSRRWRAPPLPGFDVELFIGVLSAGNHFAERMAVRKSWMQHNLIQSSRVVTRFFVAVHSREEVNIELKKEAEFFGDIVIVPYMDNYDLVVLKTVSICEYGLRTVSATYIMKCDDDTFVRVDAVINEARKVPGDKSFYIGNMNHFHKPLRHGKWAVTYEEWPEERYPPYANGPGYILSSDIAHYIVSEFESHKLRLFKMEDVSMGMWVKQFNSSKPVVYAHSLKFCQFGCIEGYYTAHYQSPRQLQCLWDKLQMQTRPQCCNMR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2954 657 Gene3D - 177 376 - -
Prci4g2954 657 SMART Gal_bind_lectin_2 182 377 IPR001079 GO:0030246
Prci4g2954 657 FunFam Hydroxyproline O-galactosyltransferase 402 645 - -
Prci4g2954 657 Pfam Galactosyltransferase 424 604 IPR002659 GO:0006486|GO:0016020|GO:0016758
Prci4g2954 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 346 605 IPR002659 GO:0006486|GO:0016020|GO:0016758
Prci4g2954 657 FunFam Hydroxyproline O-galactosyltransferase GALT2 292 376 - -
Prci4g2954 657 Gene3D - 407 634 - -
Prci4g2954 657 Pfam Galactoside-binding lectin 179 376 IPR001079 GO:0030246
Prci4g2954 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 179 377 IPR013320 -
Prci4g2954 657 CDD GLECT 182 376 IPR001079 GO:0030246
Prci4g2954 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 178 378 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2954 Prci-Chr4 41299274 41304080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2954 11 657 Glycosyltransferase AT1G74800 63.499 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2954 K20843 - qsa:O6P43_022779 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2954 4 41299274 41304080 Prci9g1599 9 28583855 28587594 CCT
Prci4g2954 4 41299274 41304080 Prci4g2954 4 41299274 41304080 ECH